Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-478P-201ENST00000363904 110 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 RNU6-153P-201ENST00000364422 104 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 RNU6-656P-201ENST00000516785 107 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 MIR3675-201ENST00000583661 73 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 AL445584.3-201ENST00000617173 78 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.92□□□□□ -2.56
XRCC3O43542 MIR124-2-201ENST00000385081 109 ntBASIC-0.93□□□□□ -2.56
XRCC3O43542 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.93□□□□□ -2.56
XRCC3O43542 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
XRCC3O43542 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.93□□□□□ -2.56
XRCC3O43542 MIR6888-201ENST00000621977 67 ntBASIC-0.93□□□□□ -2.56
XRCC3O43542 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
XRCC3O43542 IGLL4P-201ENST00000614590 133 ntBASIC-0.94□□□□□ -2.56
XRCC3O43542 RNU6-330P-201ENST00000363015 107 ntBASIC-0.95□□□□□ -2.56
XRCC3O43542 MIR519A2-201ENST00000384990 87 ntBASIC-0.95□□□□□ -2.56
XRCC3O43542 MIR517B-201ENST00000385102 67 ntBASIC-0.95□□□□□ -2.56
XRCC3O43542 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.95□□□□□ -2.56
XRCC3O43542 AL021921.1-201ENST00000442774 93 ntBASIC-0.95□□□□□ -2.56
XRCC3O43542 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.96□□□□□ -2.56
XRCC3O43542 MIR1297-201ENST00000637311 77 ntBASIC-0.96□□□□□ -2.56
XRCC3O43542 RNY1P1-201ENST00000364372 112 ntBASIC-0.97□□□□□ -2.56
XRCC3O43542 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.97□□□□□ -2.56
XRCC3O43542 SNORA8.1-201ENST00000384250 140 ntBASIC-0.97□□□□□ -2.56
XRCC3O43542 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
XRCC3O43542 RNU6-518P-201ENST00000516056 96 ntBASIC-0.97□□□□□ -2.56
XRCC3O43542 RNU6-24P-201ENST00000384440 107 ntBASIC-0.98□□□□□ -2.57
XRCC3O43542 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.98□□□□□ -2.57
XRCC3O43542 RNU6-380P-201ENST00000410207 107 ntBASIC-0.98□□□□□ -2.57
XRCC3O43542 RNY4P30-201ENST00000410216 95 ntBASIC-0.98□□□□□ -2.57
XRCC3O43542 MIR3115-201ENST00000577915 68 ntBASIC-0.98□□□□□ -2.57
XRCC3O43542 RNA5SP192-201ENST00000364404 120 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 RNU6-645P-201ENST00000364649 106 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 MIR378F-201ENST00000578143 78 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 MIR5588-201ENST00000581890 63 ntBASIC-0.99□□□□□ -2.57
XRCC3O43542 Y_RNA.73-201ENST00000362910 113 ntBASIC-1□□□□□ -2.57
XRCC3O43542 RNU6-924P-201ENST00000362926 108 ntBASIC-1□□□□□ -2.57
XRCC3O43542 RNU6-807P-201ENST00000516805 107 ntBASIC-1□□□□□ -2.57
XRCC3O43542 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
XRCC3O43542 RNU6-315P-201ENST00000362666 107 ntBASIC-1.01□□□□□ -2.57
XRCC3O43542 RNU6-979P-201ENST00000383896 107 ntBASIC-1.01□□□□□ -2.57
XRCC3O43542 RNA5SP461-201ENST00000516451 104 ntBASIC-1.01□□□□□ -2.57
XRCC3O43542 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.02□□□□□ -2.57
XRCC3O43542 RNA5SP180-201ENST00000516181 101 ntBASIC-1.02□□□□□ -2.57
XRCC3O43542 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.02□□□□□ -2.57
XRCC3O43542 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.03□□□□□ -2.57
XRCC3O43542 MIR1207-201ENST00000408249 87 ntBASIC-1.03□□□□□ -2.57
XRCC3O43542 SNORD45.1-201ENST00000363181 77 ntBASIC-1.04□□□□□ -2.58
XRCC3O43542 SNORD83B-201ENST00000386745 93 ntBASIC-1.04□□□□□ -2.58
XRCC3O43542 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
XRCC3O43542 RNU6-604P-201ENST00000390917 100 ntBASIC-1.04□□□□□ -2.58
XRCC3O43542 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.05□□□□□ -2.58
XRCC3O43542 SNORD114-3-201ENST00000364969 75 ntBASIC-1.05□□□□□ -2.58
XRCC3O43542 RNU7-171P-201ENST00000459581 62 ntBASIC-1.05□□□□□ -2.58
XRCC3O43542 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.06□□□□□ -2.58
XRCC3O43542 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.06□□□□□ -2.58
XRCC3O43542 MIR4484-201ENST00000582855 83 ntBASIC-1.06□□□□□ -2.58
XRCC3O43542 SNORD114-17-201ENST00000364699 75 ntBASIC-1.07□□□□□ -2.58
XRCC3O43542 MIR365A-201ENST00000362260 87 ntBASIC-1.08□□□□□ -2.58
XRCC3O43542 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
XRCC3O43542 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
XRCC3O43542 AL500527.2-201ENST00000454105 95 ntBASIC-1.08□□□□□ -2.58
XRCC3O43542 MIR3165-201ENST00000579874 75 ntBASIC-1.08□□□□□ -2.58
XRCC3O43542 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.09□□□□□ -2.58
XRCC3O43542 MIR147A-201ENST00000385079 72 ntBASIC-1.09□□□□□ -2.58
XRCC3O43542 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
XRCC3O43542 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.09□□□□□ -2.58
XRCC3O43542 RNU6-294P-201ENST00000364999 102 ntBASIC-1.1□□□□□ -2.59
XRCC3O43542 MIR548C-201ENST00000384815 97 ntBASIC-1.1□□□□□ -2.59
XRCC3O43542 MIR450A2-201ENST00000385022 100 ntBASIC-1.1□□□□□ -2.59
XRCC3O43542 RNU6-982P-201ENST00000516216 102 ntBASIC-1.1□□□□□ -2.59
XRCC3O43542 MIR4441-201ENST00000582623 100 ntBASIC-1.1□□□□□ -2.59
XRCC3O43542 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.11□□□□□ -2.59
XRCC3O43542 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.11□□□□□ -2.59
XRCC3O43542 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.11□□□□□ -2.59
XRCC3O43542 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.11□□□□□ -2.59
XRCC3O43542 RNU6-431P-201ENST00000383874 107 ntBASIC-1.12□□□□□ -2.59
XRCC3O43542 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.12□□□□□ -2.59
XRCC3O43542 MIR548AG1-201ENST00000579932 66 ntBASIC-1.12□□□□□ -2.59
XRCC3O43542 MIR8053-201ENST00000613344 75 ntBASIC-1.12□□□□□ -2.59
XRCC3O43542 MIR1245B-201ENST00000636115 69 ntBASIC-1.12□□□□□ -2.59
XRCC3O43542 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.13□□□□□ -2.59
XRCC3O43542 SNORD115-22-201ENST00000364456 82 ntBASIC-1.13□□□□□ -2.59
XRCC3O43542 RNU7-174P-201ENST00000516248 59 ntBASIC-1.13□□□□□ -2.59
XRCC3O43542 MIR494-201ENST00000349529 81 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 SNORD115-33-201ENST00000363723 82 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 RNU6-242P-201ENST00000384359 107 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 SNORD64-201ENST00000386683 67 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 MIR1285-2-201ENST00000408311 88 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 MIR5582-201ENST00000579697 68 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 MIR4499-201ENST00000584834 69 ntBASIC-1.14□□□□□ -2.59
XRCC3O43542 SNORA26.4-201ENST00000391188 123 ntBASIC-1.15□□□□□ -2.59
XRCC3O43542 MTND4LP1-201ENST00000446263 157 ntBASIC-1.15□□□□□ -2.59
XRCC3O43542 MIR4712-201ENST00000583750 82 ntBASIC-1.15□□□□□ -2.59
XRCC3O43542 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
XRCC3O43542 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.16□□□□□ -2.6
XRCC3O43542 RNY4P27-201ENST00000363341 96 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms