Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 AC013734.1-201ENST00000619329 111 ntBASIC-3.33□□□□□ -2.94
HMGB3O15347 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.34□□□□□ -2.94
HMGB3O15347 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.35□□□□□ -2.95
HMGB3O15347 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.35□□□□□ -2.95
HMGB3O15347 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.35□□□□□ -2.95
HMGB3O15347 RNU6-247P-201ENST00000362636 107 ntBASIC-3.36□□□□□ -2.95
HMGB3O15347 SCARNA23-201ENST00000516060 130 ntBASIC-3.36□□□□□ -2.95
HMGB3O15347 U4.4-201ENST00000620626 117 ntBASIC-3.36□□□□□ -2.95
HMGB3O15347 AL157777.2-201ENST00000258070 137 ntBASIC-3.37□□□□□ -2.95
HMGB3O15347 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.37□□□□□ -2.95
HMGB3O15347 RNU6-772P-201ENST00000516042 105 ntBASIC-3.37□□□□□ -2.95
HMGB3O15347 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.37□□□□□ -2.95
HMGB3O15347 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.38□□□□□ -2.95
HMGB3O15347 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.38□□□□□ -2.95
HMGB3O15347 U6.97-201ENST00000636904 101 ntBASIC-3.39□□□□□ -2.95
HMGB3O15347 SNORA20.1-201ENST00000364790 130 ntBASIC-3.4□□□□□ -2.95
HMGB3O15347 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.4□□□□□ -2.95
HMGB3O15347 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.41□□□□□ -2.96
HMGB3O15347 MIR548V-201ENST00000584165 80 ntBASIC-3.41□□□□□ -2.96
HMGB3O15347 MTCYBP6-201ENST00000441810 138 ntBASIC-3.42□□□□□ -2.96
HMGB3O15347 AC005520.4-201ENST00000604337 90 ntBASIC-3.42□□□□□ -2.96
HMGB3O15347 SNORD116-18-201ENST00000383961 92 ntBASIC-3.43□□□□□ -2.96
HMGB3O15347 MIR569-201ENST00000385228 96 ntBASIC-3.43□□□□□ -2.96
HMGB3O15347 RNU6-904P-201ENST00000516206 101 ntBASIC-3.43□□□□□ -2.96
HMGB3O15347 AL117187.1-201ENST00000555482 181 ntBASIC-3.43□□□□□ -2.96
HMGB3O15347 MIR548S-201ENST00000581352 82 ntBASIC-3.43□□□□□ -2.96
HMGB3O15347 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.44□□□□□ -2.96
HMGB3O15347 SNORA27.2-201ENST00000363365 126 ntBASIC-3.45□□□□□ -2.96
HMGB3O15347 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.45□□□□□ -2.96
HMGB3O15347 MIR3675-201ENST00000583661 73 ntBASIC-3.45□□□□□ -2.96
HMGB3O15347 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.46□□□□□ -2.96
HMGB3O15347 RNU6-574P-201ENST00000384265 107 ntBASIC-3.46□□□□□ -2.96
HMGB3O15347 RNU7-120P-201ENST00000459334 63 ntBASIC-3.46□□□□□ -2.96
HMGB3O15347 AC097484.2-201ENST00000509147 251 ntBASIC-3.46□□□□□ -2.96
HMGB3O15347 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.46□□□□□ -2.96
HMGB3O15347 SNORD116-16-201ENST00000384533 92 ntBASIC-3.47□□□□□ -2.96
HMGB3O15347 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.47□□□□□ -2.96
HMGB3O15347 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 MIR519C-201ENST00000385053 87 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.48□□□□□ -2.97
HMGB3O15347 RNU6-394P-201ENST00000410735 107 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 RNU6-982P-201ENST00000516216 102 ntBASIC-3.48□□□□□ -2.97
HMGB3O15347 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.49□□□□□ -2.97
HMGB3O15347 AC062037.2-201ENST00000610137 73 ntBASIC-3.49□□□□□ -2.97
HMGB3O15347 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.49□□□□□ -2.97
HMGB3O15347 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.5□□□□□ -2.97
HMGB3O15347 RNU6-141P-201ENST00000410499 105 ntBASIC-3.5□□□□□ -2.97
HMGB3O15347 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.5□□□□□ -2.97
HMGB3O15347 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.5□□□□□ -2.97
HMGB3O15347 SNORD18C-201ENST00000362704 69 ntBASIC-3.51□□□□□ -2.97
HMGB3O15347 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.51□□□□□ -2.97
HMGB3O15347 SNORD113-2-201ENST00000391082 72 ntBASIC-3.51□□□□□ -2.97
HMGB3O15347 RNU6-803P-201ENST00000516034 102 ntBASIC-3.51□□□□□ -2.97
HMGB3O15347 RNU6-604P-201ENST00000390917 100 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.52□□□□□ -2.97
HMGB3O15347 RNU6-330P-201ENST00000363015 107 ntBASIC-3.53□□□□□ -2.97
HMGB3O15347 RNU7-61P-201ENST00000515897 61 ntBASIC-3.53□□□□□ -2.97
HMGB3O15347 RNU6-624P-201ENST00000363411 107 ntBASIC-3.54□□□□□ -2.98
HMGB3O15347 MIR630-201ENST00000384957 97 ntBASIC-3.54□□□□□ -2.98
HMGB3O15347 RNU6-995P-201ENST00000391244 107 ntBASIC-3.54□□□□□ -2.98
HMGB3O15347 RNY3P8-201ENST00000411366 126 ntBASIC-3.54□□□□□ -2.98
HMGB3O15347 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.55□□□□□ -2.98
HMGB3O15347 RNA5SP215-201ENST00000363440 122 ntBASIC-3.55□□□□□ -2.98
HMGB3O15347 SNORD63.2-201ENST00000516303 64 ntBASIC-3.55□□□□□ -2.98
HMGB3O15347 SNORD1B-201ENST00000363091 84 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 RNU6-669P-201ENST00000365575 107 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 MTND4LP9-201ENST00000427694 174 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 RNU6-182P-201ENST00000516970 105 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 MIR3914-2-201ENST00000637339 95 ntBASIC-3.56□□□□□ -2.98
HMGB3O15347 SNORD45.1-201ENST00000363181 77 ntBASIC-3.57□□□□□ -2.98
HMGB3O15347 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.57□□□□□ -2.98
HMGB3O15347 RNU6-303P-201ENST00000517091 106 ntBASIC-3.57□□□□□ -2.98
HMGB3O15347 SNORA8.1-201ENST00000384250 140 ntBASIC-3.58□□□□□ -2.98
HMGB3O15347 RNU7-151P-201ENST00000516930 53 ntBASIC-3.58□□□□□ -2.98
HMGB3O15347 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 RNU7-107P-201ENST00000459121 61 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 SNORD33.1-201ENST00000516213 88 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 AC044792.1-201ENST00000593294 196 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.59□□□□□ -2.98
HMGB3O15347 SNORD115-37-201ENST00000363768 82 ntBASIC-3.6□□□□□ -2.99
HMGB3O15347 MTND4LP1-201ENST00000446263 157 ntBASIC-3.6□□□□□ -2.99
HMGB3O15347 U7.3-201ENST00000616123 62 ntBASIC-3.6□□□□□ -2.99
HMGB3O15347 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 SNORA41B-201ENST00000384785 128 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.61□□□□□ -2.99
HMGB3O15347 MTATP8P2-201ENST00000435212 202 ntBASIC-3.61□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms