Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-478P-201ENST00000363904 110 ntBASIC-1.14□□□□□ -2.59
NPHP1O15259 RNU6-129P-201ENST00000391022 107 ntBASIC-1.14□□□□□ -2.59
NPHP1O15259 AC074348.1-201ENST00000426503 132 ntBASIC-1.14□□□□□ -2.59
NPHP1O15259 MIR3675-201ENST00000583661 73 ntBASIC-1.14□□□□□ -2.59
NPHP1O15259 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
NPHP1O15259 AC006160.2-201ENST00000637708 154 ntBASIC-1.15□□□□□ -2.59
NPHP1O15259 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.16□□□□□ -2.6
NPHP1O15259 RNU6-645P-201ENST00000364649 106 ntBASIC-1.16□□□□□ -2.6
NPHP1O15259 RNU6-168P-201ENST00000516189 101 ntBASIC-1.16□□□□□ -2.6
NPHP1O15259 MIR378F-201ENST00000578143 78 ntBASIC-1.16□□□□□ -2.6
NPHP1O15259 snoU83B.1-201ENST00000517136 88 ntBASIC-1.17□□□□□ -2.6
NPHP1O15259 U2.7-201ENST00000619197 100 ntBASIC-1.17□□□□□ -2.6
NPHP1O15259 SNORA8.1-201ENST00000384250 140 ntBASIC-1.18□□□□□ -2.6
NPHP1O15259 U2.22-201ENST00000636441 106 ntBASIC-1.18□□□□□ -2.6
NPHP1O15259 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.19□□□□□ -2.6
NPHP1O15259 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.19□□□□□ -2.6
NPHP1O15259 RNA5SP89-201ENST00000410300 108 ntBASIC-1.19□□□□□ -2.6
NPHP1O15259 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.19□□□□□ -2.6
NPHP1O15259 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.2□□□□□ -2.6
NPHP1O15259 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.2□□□□□ -2.6
NPHP1O15259 RNU6-807P-201ENST00000516805 107 ntBASIC-1.2□□□□□ -2.6
NPHP1O15259 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.2□□□□□ -2.6
NPHP1O15259 RNU6-49P-201ENST00000384256 107 ntBASIC-1.21□□□□□ -2.6
NPHP1O15259 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.21□□□□□ -2.6
NPHP1O15259 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
NPHP1O15259 MIR1297-201ENST00000637311 77 ntBASIC-1.22□□□□□ -2.6
NPHP1O15259 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.23□□□□□ -2.61
NPHP1O15259 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.23□□□□□ -2.61
NPHP1O15259 SNORD45.1-201ENST00000363181 77 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 RNU6-604P-201ENST00000390917 100 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 SNORD63.1-201ENST00000516178 80 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 IGLL4P-201ENST00000614590 133 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.24□□□□□ -2.61
NPHP1O15259 RNU6-380P-201ENST00000410207 107 ntBASIC-1.25□□□□□ -2.61
NPHP1O15259 MIR548AG1-201ENST00000579932 66 ntBASIC-1.25□□□□□ -2.61
NPHP1O15259 MIR4306-201ENST00000583390 91 ntBASIC-1.25□□□□□ -2.61
NPHP1O15259 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.26□□□□□ -2.61
NPHP1O15259 RNY1P1-201ENST00000364372 112 ntBASIC-1.26□□□□□ -2.61
NPHP1O15259 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.26□□□□□ -2.61
NPHP1O15259 MIR548C-201ENST00000384815 97 ntBASIC-1.26□□□□□ -2.61
NPHP1O15259 SNORA26.4-201ENST00000391188 123 ntBASIC-1.26□□□□□ -2.61
NPHP1O15259 SNORD115-33-201ENST00000363723 82 ntBASIC-1.27□□□□□ -2.61
NPHP1O15259 SNORD115-22-201ENST00000364456 82 ntBASIC-1.27□□□□□ -2.61
NPHP1O15259 RNU6-982P-201ENST00000516216 102 ntBASIC-1.27□□□□□ -2.61
NPHP1O15259 MIR5588-201ENST00000581890 63 ntBASIC-1.27□□□□□ -2.61
NPHP1O15259 MIR4484-201ENST00000582855 83 ntBASIC-1.27□□□□□ -2.61
NPHP1O15259 RNU6-315P-201ENST00000362666 107 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 RNU6-24P-201ENST00000384440 107 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 MIR29B1-201ENST00000385015 81 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 MIR6818-201ENST00000621576 65 ntBASIC-1.28□□□□□ -2.61
NPHP1O15259 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.29□□□□□ -2.62
NPHP1O15259 SNX3P1X-201ENST00000414887 175 ntBASIC-1.29□□□□□ -2.62
NPHP1O15259 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.29□□□□□ -2.62
NPHP1O15259 RNU6-153P-201ENST00000364422 104 ntBASIC-1.3□□□□□ -2.62
NPHP1O15259 RNU6-979P-201ENST00000383896 107 ntBASIC-1.3□□□□□ -2.62
NPHP1O15259 RNU7-174P-201ENST00000516248 59 ntBASIC-1.3□□□□□ -2.62
NPHP1O15259 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.3□□□□□ -2.62
NPHP1O15259 RNU6-246P-201ENST00000384702 107 ntBASIC-1.31□□□□□ -2.62
NPHP1O15259 RNY4P30-201ENST00000410216 95 ntBASIC-1.31□□□□□ -2.62
NPHP1O15259 MIR1468-201ENST00000410600 86 ntBASIC-1.31□□□□□ -2.62
NPHP1O15259 MIR4324-201ENST00000584846 72 ntBASIC-1.31□□□□□ -2.62
NPHP1O15259 RNA5SP26-201ENST00000362406 119 ntBASIC-1.32□□□□□ -2.62
NPHP1O15259 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.32□□□□□ -2.62
NPHP1O15259 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
NPHP1O15259 MIR587-201ENST00000384845 96 ntBASIC-1.34□□□□□ -2.62
NPHP1O15259 MIR8485-201ENST00000401372 91 ntBASIC-1.34□□□□□ -2.62
NPHP1O15259 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.34□□□□□ -2.62
NPHP1O15259 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 RNU7-171P-201ENST00000459581 62 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 RNU6-732P-201ENST00000516033 103 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 U7.5-201ENST00000517224 61 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 MIR8053-201ENST00000613344 75 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 MIR6738-201ENST00000619620 64 ntBASIC-1.35□□□□□ -2.63
NPHP1O15259 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.36□□□□□ -2.63
NPHP1O15259 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.36□□□□□ -2.63
NPHP1O15259 AP002795.1-201ENST00000534879 84 ntBASIC-1.36□□□□□ -2.63
NPHP1O15259 MIR527-201ENST00000385244 85 ntBASIC-1.37□□□□□ -2.63
NPHP1O15259 AL353691.2-201ENST00000443795 59 ntBASIC-1.37□□□□□ -2.63
NPHP1O15259 MTND4LP1-201ENST00000446263 157 ntBASIC-1.37□□□□□ -2.63
NPHP1O15259 RNU7-88P-201ENST00000458752 63 ntBASIC-1.37□□□□□ -2.63
NPHP1O15259 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.37□□□□□ -2.63
NPHP1O15259 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
NPHP1O15259 RNU6-698P-201ENST00000363523 107 ntBASIC-1.39□□□□□ -2.63
NPHP1O15259 RNU6-34P-201ENST00000364874 107 ntBASIC-1.39□□□□□ -2.63
NPHP1O15259 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.39□□□□□ -2.63
NPHP1O15259 RNU6-587P-201ENST00000391282 106 ntBASIC-1.39□□□□□ -2.63
NPHP1O15259 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
NPHP1O15259 SNORD113.1-201ENST00000363280 73 ntBASIC-1.4□□□□□ -2.63
NPHP1O15259 SNORD19-201ENST00000391191 68 ntBASIC-1.4□□□□□ -2.63
NPHP1O15259 MIR889-201ENST00000401280 79 ntBASIC-1.4□□□□□ -2.63
NPHP1O15259 MIR664A-201ENST00000626086 82 ntBASIC-1.4□□□□□ -2.63
NPHP1O15259 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.41□□□□□ -2.64
NPHP1O15259 RNU6-458P-201ENST00000384179 107 ntBASIC-1.41□□□□□ -2.64
NPHP1O15259 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.64
NPHP1O15259 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.41□□□□□ -2.64
NPHP1O15259 AC138207.3-201ENST00000585289 166 ntBASIC-1.41□□□□□ -2.64
NPHP1O15259 U6.58-201ENST00000613107 107 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms