Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.92□□□□□ -2.56
NKX6-3A6NJ46 RNU6-645P-201ENST00000364649 106 ntBASIC-0.92□□□□□ -2.56
NKX6-3A6NJ46 SNORD114-17-201ENST00000364699 75 ntBASIC-0.92□□□□□ -2.56
NKX6-3A6NJ46 RNU6-604P-201ENST00000390917 100 ntBASIC-0.93□□□□□ -2.56
NKX6-3A6NJ46 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.94□□□□□ -2.56
NKX6-3A6NJ46 AL500527.2-201ENST00000454105 95 ntBASIC-0.94□□□□□ -2.56
NKX6-3A6NJ46 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.94□□□□□ -2.56
NKX6-3A6NJ46 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.94□□□□□ -2.56
NKX6-3A6NJ46 SNORD45.1-201ENST00000363181 77 ntBASIC-0.95□□□□□ -2.56
NKX6-3A6NJ46 RNU6-153P-201ENST00000364422 104 ntBASIC-0.95□□□□□ -2.56
NKX6-3A6NJ46 AL021921.1-201ENST00000442774 93 ntBASIC-0.95□□□□□ -2.56
NKX6-3A6NJ46 RNU7-154P-201ENST00000516194 62 ntBASIC-0.95□□□□□ -2.56
NKX6-3A6NJ46 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.96□□□□□ -2.56
NKX6-3A6NJ46 MIR409-201ENST00000362237 79 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 RNU6-924P-201ENST00000362926 108 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 AC074348.1-201ENST00000426503 132 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 RNU6-982P-201ENST00000516216 102 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 MIR5588-201ENST00000581890 63 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 U2.7-201ENST00000619197 100 ntBASIC-0.97□□□□□ -2.56
NKX6-3A6NJ46 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.98□□□□□ -2.57
NKX6-3A6NJ46 RNU6-380P-201ENST00000410207 107 ntBASIC-0.99□□□□□ -2.57
NKX6-3A6NJ46 RNU6-807P-201ENST00000516805 107 ntBASIC-0.99□□□□□ -2.57
NKX6-3A6NJ46 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.99□□□□□ -2.57
NKX6-3A6NJ46 MIR494-201ENST00000349529 81 ntBASIC-1□□□□□ -2.57
NKX6-3A6NJ46 SCARNA18B-201ENST00000458806 135 ntBASIC-1□□□□□ -2.57
NKX6-3A6NJ46 MIR548AG1-201ENST00000579932 66 ntBASIC-1□□□□□ -2.57
NKX6-3A6NJ46 MIR147A-201ENST00000385079 72 ntBASIC-1.01□□□□□ -2.57
NKX6-3A6NJ46 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
NKX6-3A6NJ46 RNU6-431P-201ENST00000383874 107 ntBASIC-1.02□□□□□ -2.57
NKX6-3A6NJ46 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
NKX6-3A6NJ46 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.03□□□□□ -2.57
NKX6-3A6NJ46 RNU6-979P-201ENST00000383896 107 ntBASIC-1.03□□□□□ -2.57
NKX6-3A6NJ46 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
NKX6-3A6NJ46 MIR664A-201ENST00000626086 82 ntBASIC-1.03□□□□□ -2.57
NKX6-3A6NJ46 MIR1297-201ENST00000637311 77 ntBASIC-1.03□□□□□ -2.57
NKX6-3A6NJ46 RNU7-88P-201ENST00000458752 63 ntBASIC-1.04□□□□□ -2.58
NKX6-3A6NJ46 MIR378F-201ENST00000578143 78 ntBASIC-1.04□□□□□ -2.58
NKX6-3A6NJ46 MIR4324-201ENST00000584846 72 ntBASIC-1.04□□□□□ -2.58
NKX6-3A6NJ46 AL627230.5-201ENST00000619807 58 ntBASIC-1.04□□□□□ -2.58
NKX6-3A6NJ46 MIR382-201ENST00000637119 76 ntBASIC-1.04□□□□□ -2.58
NKX6-3A6NJ46 RNY1P9-201ENST00000532431 109 ntBASIC-1.05□□□□□ -2.58
NKX6-3A6NJ46 RNU6-294P-201ENST00000364999 102 ntBASIC-1.06□□□□□ -2.58
NKX6-3A6NJ46 RNU6-24P-201ENST00000384440 107 ntBASIC-1.06□□□□□ -2.58
NKX6-3A6NJ46 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.06□□□□□ -2.58
NKX6-3A6NJ46 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
NKX6-3A6NJ46 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.07□□□□□ -2.58
NKX6-3A6NJ46 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 RNU6-315P-201ENST00000362666 107 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 SNORD57-201ENST00000448188 72 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 MIR548V-201ENST00000584165 80 ntBASIC-1.08□□□□□ -2.58
NKX6-3A6NJ46 SNORD115-22-201ENST00000364456 82 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 RNU6-242P-201ENST00000384359 107 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 RNA5SP266-201ENST00000410273 108 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 SNORD63.1-201ENST00000516178 80 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 U7.5-201ENST00000517224 61 ntBASIC-1.09□□□□□ -2.58
NKX6-3A6NJ46 RNA5SP331-201ENST00000364986 107 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 RNU6-10P-201ENST00000384036 107 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 SNORD45A-201ENST00000384512 84 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 MIR450A2-201ENST00000385022 100 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 SNORA26.4-201ENST00000391188 123 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 MTND4LP1-201ENST00000446263 157 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 RNU7-171P-201ENST00000459581 62 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 RNU7-174P-201ENST00000516248 59 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 MIR5582-201ENST00000579697 68 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.1□□□□□ -2.59
NKX6-3A6NJ46 snoU83B.1-201ENST00000517136 88 ntBASIC-1.11□□□□□ -2.59
NKX6-3A6NJ46 RNU6-246P-201ENST00000384702 107 ntBASIC-1.12□□□□□ -2.59
NKX6-3A6NJ46 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
NKX6-3A6NJ46 MIR4712-201ENST00000583750 82 ntBASIC-1.12□□□□□ -2.59
NKX6-3A6NJ46 SNORD113.1-201ENST00000363280 73 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 RNU6-668P-201ENST00000364180 107 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 MIR8053-201ENST00000613344 75 ntBASIC-1.13□□□□□ -2.59
NKX6-3A6NJ46 SNORD115-33-201ENST00000363723 82 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 MIR527-201ENST00000385244 85 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 MIR1245B-201ENST00000636115 69 ntBASIC-1.14□□□□□ -2.59
NKX6-3A6NJ46 RNA5SP192-201ENST00000364404 120 ntBASIC-1.15□□□□□ -2.59
NKX6-3A6NJ46 RNU6-732P-201ENST00000516033 103 ntBASIC-1.15□□□□□ -2.59
NKX6-3A6NJ46 RNU6-458P-201ENST00000384179 107 ntBASIC-1.16□□□□□ -2.6
NKX6-3A6NJ46 MIR630-201ENST00000384957 97 ntBASIC-1.16□□□□□ -2.6
NKX6-3A6NJ46 RNU6-70P-201ENST00000516438 60 ntBASIC-1.16□□□□□ -2.6
NKX6-3A6NJ46 U6.58-201ENST00000613107 107 ntBASIC-1.16□□□□□ -2.6
NKX6-3A6NJ46 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.17□□□□□ -2.6
NKX6-3A6NJ46 AL353691.2-201ENST00000443795 59 ntBASIC-1.17□□□□□ -2.6
NKX6-3A6NJ46 AC138207.3-201ENST00000585289 166 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms