Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MIR892B-201ENST00000401279 77 ntBASIC0.08□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.08□□□□□ -2.4
IGKV3D-20A0A0C4DH25 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.07□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR4743-201ENST00000584576 69 ntBASIC0.07□□□□□ -2.4
IGKV3D-20A0A0C4DH25 AC108676.2-201ENST00000605225 163 ntBASIC0.07□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MTND4LP19-201ENST00000403051 166 ntBASIC0.06□□□□□ -2.4
IGKV3D-20A0A0C4DH25 U7.5-201ENST00000517224 61 ntBASIC0.06□□□□□ -2.4
IGKV3D-20A0A0C4DH25 AL590491.3-201ENST00000610731 82 ntBASIC0.06□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR7978-201ENST00000636158 59 ntBASIC0.06□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6-1312P-201ENST00000362425 108 ntBASIC0.05□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU7-88P-201ENST00000458752 63 ntBASIC0.05□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6-1223P-201ENST00000517124 104 ntBASIC0.05□□□□□ -2.4
IGKV3D-20A0A0C4DH25 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6-172P-201ENST00000411000 93 ntBASIC0.04□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6-1262P-201ENST00000516217 96 ntBASIC0.04□□□□□ -2.4
IGKV3D-20A0A0C4DH25 RNU6-810P-201ENST00000364001 107 ntBASIC0.03□□□□□ -2.4
IGKV3D-20A0A0C4DH25 SNORD38.3-201ENST00000516599 73 ntBASIC0.03□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR4490-201ENST00000582647 84 ntBASIC0.03□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR6854-201ENST00000614935 69 ntBASIC0.03□□□□□ -2.4
IGKV3D-20A0A0C4DH25 MIR579-201ENST00000385221 98 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD116.2-201ENST00000391251 93 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-1133P-201ENST00000410963 100 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 AL445193.1-201ENST00000441183 141 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-1174P-201ENST00000517278 101 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 snoR1.1-201ENST00000628177 80 ntBASIC0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD49B-201ENST00000365172 72 ntBASIC0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNA5SP169-201ENST00000517268 117 ntBASIC0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 AP002795.1-201ENST00000534879 84 ntBASIC0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR924-201ENST00000638017 53 ntBASIC0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 Y_RNA.164-201ENST00000363709 102 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 Y_RNA.224-201ENST00000364308 111 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-974P-201ENST00000384099 108 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR124-2-201ENST00000385081 109 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD19-201ENST00000391191 68 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-1267P-201ENST00000410747 107 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU7-151P-201ENST00000516930 53 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR6851-201ENST00000617060 67 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MTRNR2L9-201ENST00000622562 75 ntBASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
IGKV3D-20A0A0C4DH25 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD57-201ENST00000448188 72 ntBASIC-0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-980P-201ENST00000516925 103 ntBASIC-0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR7110-201ENST00000612638 86 ntBASIC-0.01□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD114-11-201ENST00000363738 75 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORA62.4-201ENST00000365504 151 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORA40B-201ENST00000385573 128 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-696P-201ENST00000390834 107 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNA5SP436-201ENST00000516020 115 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-924P-201ENST00000362926 108 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-42P-201ENST00000384165 107 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 RNU6-520P-201ENST00000384717 104 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR520D-201ENST00000385002 87 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR125B1-201ENST00000385236 88 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 MIR6734-201ENST00000621166 68 ntBASIC-0.03□□□□□ -2.41
IGKV3D-20A0A0C4DH25 SNORD114-26-201ENST00000363543 72 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-614P-201ENST00000384369 107 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-901P-201ENST00000384593 106 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-987P-201ENST00000384759 104 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-258P-201ENST00000390884 101 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU4-37P-201ENST00000410214 84 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-732P-201ENST00000516033 103 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 MIR4514-201ENST00000581410 57 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 U6.59-201ENST00000615686 107 ntBASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.05□□□□□ -2.42
IGKV3D-20A0A0C4DH25 MIR499A-201ENST00000384903 122 ntBASIC-0.05□□□□□ -2.42
IGKV3D-20A0A0C4DH25 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.05□□□□□ -2.42
IGKV3D-20A0A0C4DH25 MIR6718-201ENST00000616153 80 ntBASIC-0.05□□□□□ -2.42
IGKV3D-20A0A0C4DH25 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.06□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-936P-201ENST00000384005 107 ntBASIC-0.06□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU7-119P-201ENST00000459279 63 ntBASIC-0.06□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.06□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SNORD114-12-201ENST00000365400 75 ntBASIC-0.07□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-721P-201ENST00000410155 105 ntBASIC-0.07□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SNORD22.1-201ENST00000516331 125 ntBASIC-0.07□□□□□ -2.42
IGKV3D-20A0A0C4DH25 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNA5SP220-201ENST00000516298 104 ntBASIC-0.08□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNA5SP66-201ENST00000517178 101 ntBASIC-0.08□□□□□ -2.42
IGKV3D-20A0A0C4DH25 MIR3170-201ENST00000582699 77 ntBASIC-0.08□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.08□□□□□ -2.42
IGKV3D-20A0A0C4DH25 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.09□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SNORD114-23-201ENST00000363536 72 ntBASIC-0.09□□□□□ -2.42
IGKV3D-20A0A0C4DH25 MIR548AA1-201ENST00000384971 97 ntBASIC-0.09□□□□□ -2.42
IGKV3D-20A0A0C4DH25 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.09□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SNORD63.1-201ENST00000516178 80 ntBASIC-0.09□□□□□ -2.42
IGKV3D-20A0A0C4DH25 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 RNU6-35P-201ENST00000384530 107 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 RNA5SP300-201ENST00000391197 107 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 SNORD4A-201ENST00000459174 72 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 RNU6-419P-201ENST00000517030 63 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 MIR548X-201ENST00000580069 75 ntBASIC-0.1□□□□□ -2.43
IGKV3D-20A0A0C4DH25 MIR429-201ENST00000362106 83 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms