Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 AC104692.1-201ENST00000472406 90 ntBASIC-0.1□□□□□ -2.43
TDP1Q9NUW8 MIR6739-201ENST00000622461 75 ntBASIC-0.1□□□□□ -2.43
TDP1Q9NUW8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.11□□□□□ -2.43
TDP1Q9NUW8 AC244250.2-201ENST00000418731 148 ntBASIC-0.11□□□□□ -2.43
TDP1Q9NUW8 MIR6773-201ENST00000612812 74 ntBASIC-0.11□□□□□ -2.43
TDP1Q9NUW8 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
TDP1Q9NUW8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.12□□□□□ -2.43
TDP1Q9NUW8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.12□□□□□ -2.43
TDP1Q9NUW8 MIR521-2-201ENST00000384818 87 ntBASIC-0.12□□□□□ -2.43
TDP1Q9NUW8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
TDP1Q9NUW8 MIR664A-201ENST00000626086 82 ntBASIC-0.12□□□□□ -2.43
TDP1Q9NUW8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 RNU6-279P-201ENST00000391297 101 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 MIR6759-201ENST00000638110 65 ntBASIC-0.13□□□□□ -2.43
TDP1Q9NUW8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.14□□□□□ -2.43
TDP1Q9NUW8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.14□□□□□ -2.43
TDP1Q9NUW8 RNU6-857P-201ENST00000515893 110 ntBASIC-0.14□□□□□ -2.43
TDP1Q9NUW8 MIR1295B-201ENST00000636144 60 ntBASIC-0.14□□□□□ -2.43
TDP1Q9NUW8 SNORD49B-201ENST00000365172 72 ntBASIC-0.15□□□□□ -2.43
TDP1Q9NUW8 MIR9-2-201ENST00000384838 87 ntBASIC-0.15□□□□□ -2.43
TDP1Q9NUW8 RNA5SP225-201ENST00000410874 135 ntBASIC-0.15□□□□□ -2.43
TDP1Q9NUW8 MIR655-201ENST00000362159 97 ntBASIC-0.16□□□□□ -2.44
TDP1Q9NUW8 AC090617.8-201ENST00000623339 167 ntBASIC-0.16□□□□□ -2.44
TDP1Q9NUW8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.17□□□□□ -2.44
TDP1Q9NUW8 MIRLET7B-201ENST00000385140 83 ntBASIC-0.17□□□□□ -2.44
TDP1Q9NUW8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.17□□□□□ -2.44
TDP1Q9NUW8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.18□□□□□ -2.44
TDP1Q9NUW8 RNU6-70P-201ENST00000516438 60 ntBASIC-0.18□□□□□ -2.44
TDP1Q9NUW8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.18□□□□□ -2.44
TDP1Q9NUW8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.19□□□□□ -2.44
TDP1Q9NUW8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.19□□□□□ -2.44
TDP1Q9NUW8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.19□□□□□ -2.44
TDP1Q9NUW8 MIR3134-201ENST00000579433 74 ntBASIC-0.19□□□□□ -2.44
TDP1Q9NUW8 U7.4-201ENST00000614961 63 ntBASIC-0.19□□□□□ -2.44
TDP1Q9NUW8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
TDP1Q9NUW8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.2□□□□□ -2.44
TDP1Q9NUW8 MIR8053-201ENST00000613344 75 ntBASIC-0.2□□□□□ -2.44
TDP1Q9NUW8 SNORD115-22-201ENST00000364456 82 ntBASIC-0.21□□□□□ -2.44
TDP1Q9NUW8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TDP1Q9NUW8 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.21□□□□□ -2.44
TDP1Q9NUW8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.21□□□□□ -2.44
TDP1Q9NUW8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TDP1Q9NUW8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
TDP1Q9NUW8 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.22□□□□□ -2.44
TDP1Q9NUW8 RNU6-982P-201ENST00000516216 102 ntBASIC-0.22□□□□□ -2.44
TDP1Q9NUW8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.23□□□□□ -2.45
TDP1Q9NUW8 RNU6-587P-201ENST00000391282 106 ntBASIC-0.24□□□□□ -2.45
TDP1Q9NUW8 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
TDP1Q9NUW8 uc_338.36-201ENST00000622331 158 ntBASIC-0.24□□□□□ -2.45
TDP1Q9NUW8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 SNORD45A-201ENST00000384512 84 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 MIR1255B2-201ENST00000408618 67 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 RNU6-881P-201ENST00000516813 102 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 AL391099.1-201ENST00000624635 187 ntBASIC-0.25□□□□□ -2.45
TDP1Q9NUW8 SNORD115-23-201ENST00000364461 82 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 RNU6-411P-201ENST00000384451 107 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 MIR154-201ENST00000385243 84 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 snoR1.1-201ENST00000628177 80 ntBASIC-0.26□□□□□ -2.45
TDP1Q9NUW8 SNORD113.1-201ENST00000363280 73 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 SNORD56B-201ENST00000384713 71 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 RNU6-687P-201ENST00000516443 89 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 MIR4263-201ENST00000584745 83 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 MIR3666-201ENST00000607845 111 ntBASIC-0.27□□□□□ -2.45
TDP1Q9NUW8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.28□□□□□ -2.45
TDP1Q9NUW8 MIR4432-201ENST00000581823 84 ntBASIC-0.28□□□□□ -2.45
TDP1Q9NUW8 AL590491.3-201ENST00000610731 82 ntBASIC-0.28□□□□□ -2.45
TDP1Q9NUW8 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
TDP1Q9NUW8 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
TDP1Q9NUW8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.3□□□□□ -2.46
TDP1Q9NUW8 U2.7-201ENST00000619197 100 ntBASIC-0.3□□□□□ -2.46
TDP1Q9NUW8 MTND4LP1-201ENST00000446263 157 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 MIR5589-201ENST00000579442 60 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 MIR4802-201ENST00000581881 80 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 MIR4636-201ENST00000582271 80 ntBASIC-0.31□□□□□ -2.46
TDP1Q9NUW8 SNORD115-31-201ENST00000365318 82 ntBASIC-0.32□□□□□ -2.46
TDP1Q9NUW8 MIR889-201ENST00000401280 79 ntBASIC-0.32□□□□□ -2.46
TDP1Q9NUW8 AL445193.1-201ENST00000441183 141 ntBASIC-0.32□□□□□ -2.46
TDP1Q9NUW8 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.33□□□□□ -2.46
TDP1Q9NUW8 MIR548C-201ENST00000384815 97 ntBASIC-0.33□□□□□ -2.46
TDP1Q9NUW8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
TDP1Q9NUW8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.33□□□□□ -2.46
TDP1Q9NUW8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.33□□□□□ -2.46
TDP1Q9NUW8 RNU6-895P-201ENST00000384125 103 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 AL021921.1-201ENST00000442774 93 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 RNU6-518P-201ENST00000516056 96 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 MIR5704-201ENST00000584029 77 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 AL353803.5-201ENST00000599815 141 ntBASIC-0.34□□□□□ -2.46
TDP1Q9NUW8 MIR4788-201ENST00000639104 80 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 224.8 ms