Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR1255B2-201ENST00000408618 67 ntBASIC-0.86□□□□□ -2.55
CHMP1AQ9HD42 RNU6-721P-201ENST00000410155 105 ntBASIC-0.86□□□□□ -2.55
CHMP1AQ9HD42 RNU6-844P-201ENST00000517175 102 ntBASIC-0.86□□□□□ -2.55
CHMP1AQ9HD42 AP001180.6-201ENST00000584918 159 ntBASIC-0.86□□□□□ -2.55
CHMP1AQ9HD42 AL353803.5-201ENST00000599815 141 ntBASIC-0.86□□□□□ -2.55
CHMP1AQ9HD42 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
CHMP1AQ9HD42 SNORA62.4-201ENST00000365504 151 ntBASIC-0.87□□□□□ -2.55
CHMP1AQ9HD42 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.87□□□□□ -2.55
CHMP1AQ9HD42 RNU6-168P-201ENST00000516189 101 ntBASIC-0.87□□□□□ -2.55
CHMP1AQ9HD42 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.88□□□□□ -2.55
CHMP1AQ9HD42 RNU6-557P-201ENST00000516842 110 ntBASIC-0.88□□□□□ -2.55
CHMP1AQ9HD42 MIR7111-201ENST00000619751 72 ntBASIC-0.88□□□□□ -2.55
CHMP1AQ9HD42 RNA5SP89-201ENST00000410300 108 ntBASIC-0.89□□□□□ -2.55
CHMP1AQ9HD42 RNA5SP470-201ENST00000516463 106 ntBASIC-0.89□□□□□ -2.55
CHMP1AQ9HD42 MIR4464-201ENST00000580818 92 ntBASIC-0.89□□□□□ -2.55
CHMP1AQ9HD42 MIR4802-201ENST00000581881 80 ntBASIC-0.89□□□□□ -2.55
CHMP1AQ9HD42 RPS29P8-201ENST00000445109 171 ntBASIC-0.9□□□□□ -2.55
CHMP1AQ9HD42 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.91□□□□□ -2.56
CHMP1AQ9HD42 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
CHMP1AQ9HD42 SNORD75.1-201ENST00000408373 60 ntBASIC-0.91□□□□□ -2.56
CHMP1AQ9HD42 MIR101-1-201ENST00000362265 75 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 RNU6-49P-201ENST00000384256 107 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.92□□□□□ -2.56
CHMP1AQ9HD42 RNU6-478P-201ENST00000363904 110 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 RNU6-686P-201ENST00000364839 107 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 MIR124-2-201ENST00000385081 109 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 AP000533.3-201ENST00000447704 118 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 AC022137.1-201ENST00000483735 151 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 MIR6888-201ENST00000621977 67 ntBASIC-0.93□□□□□ -2.56
CHMP1AQ9HD42 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.94□□□□□ -2.56
CHMP1AQ9HD42 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.94□□□□□ -2.56
CHMP1AQ9HD42 RNU6-881P-201ENST00000516813 102 ntBASIC-0.94□□□□□ -2.56
CHMP1AQ9HD42 RNU6-303P-201ENST00000517091 106 ntBASIC-0.94□□□□□ -2.56
CHMP1AQ9HD42 AC006160.2-201ENST00000637708 154 ntBASIC-0.94□□□□□ -2.56
CHMP1AQ9HD42 RNU6-330P-201ENST00000363015 107 ntBASIC-0.95□□□□□ -2.56
CHMP1AQ9HD42 RNU6-129P-201ENST00000391022 107 ntBASIC-0.95□□□□□ -2.56
CHMP1AQ9HD42 RNU6-656P-201ENST00000516785 107 ntBASIC-0.95□□□□□ -2.56
CHMP1AQ9HD42 AL445584.3-201ENST00000617173 78 ntBASIC-0.95□□□□□ -2.56
CHMP1AQ9HD42 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.96□□□□□ -2.56
CHMP1AQ9HD42 MIR517B-201ENST00000385102 67 ntBASIC-0.96□□□□□ -2.56
CHMP1AQ9HD42 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.96□□□□□ -2.56
CHMP1AQ9HD42 RNU6-153P-201ENST00000364422 104 ntBASIC-0.97□□□□□ -2.56
CHMP1AQ9HD42 AC074348.1-201ENST00000426503 132 ntBASIC-0.97□□□□□ -2.56
CHMP1AQ9HD42 SNORD18.2-201ENST00000459604 70 ntBASIC-0.97□□□□□ -2.56
CHMP1AQ9HD42 MIR5589-201ENST00000579442 60 ntBASIC-0.97□□□□□ -2.56
CHMP1AQ9HD42 MIR4493-201ENST00000584016 73 ntBASIC-0.97□□□□□ -2.56
CHMP1AQ9HD42 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.98□□□□□ -2.57
CHMP1AQ9HD42 MIR519A2-201ENST00000384990 87 ntBASIC-0.98□□□□□ -2.57
CHMP1AQ9HD42 RNA5SP451-201ENST00000410588 110 ntBASIC-0.98□□□□□ -2.57
CHMP1AQ9HD42 MIR3675-201ENST00000583661 73 ntBASIC-0.98□□□□□ -2.57
CHMP1AQ9HD42 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.98□□□□□ -2.57
CHMP1AQ9HD42 RNU7-154P-201ENST00000516194 62 ntBASIC-0.99□□□□□ -2.57
CHMP1AQ9HD42 Y_RNA.73-201ENST00000362910 113 ntBASIC-1□□□□□ -2.57
CHMP1AQ9HD42 RNU6-518P-201ENST00000516056 96 ntBASIC-1□□□□□ -2.57
CHMP1AQ9HD42 Y_RNA.698-201ENST00000516798 118 ntBASIC-1□□□□□ -2.57
CHMP1AQ9HD42 RNU6-645P-201ENST00000364649 106 ntBASIC-1.01□□□□□ -2.57
CHMP1AQ9HD42 SNORA8.1-201ENST00000384250 140 ntBASIC-1.01□□□□□ -2.57
CHMP1AQ9HD42 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.01□□□□□ -2.57
CHMP1AQ9HD42 IGLL4P-201ENST00000614590 133 ntBASIC-1.01□□□□□ -2.57
CHMP1AQ9HD42 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.02□□□□□ -2.57
CHMP1AQ9HD42 RNY1P1-201ENST00000364372 112 ntBASIC-1.02□□□□□ -2.57
CHMP1AQ9HD42 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.02□□□□□ -2.57
CHMP1AQ9HD42 RNY4P30-201ENST00000410216 95 ntBASIC-1.03□□□□□ -2.57
CHMP1AQ9HD42 AL021921.1-201ENST00000442774 93 ntBASIC-1.03□□□□□ -2.57
CHMP1AQ9HD42 MIR5588-201ENST00000581890 63 ntBASIC-1.03□□□□□ -2.57
CHMP1AQ9HD42 U2.7-201ENST00000619197 100 ntBASIC-1.04□□□□□ -2.58
CHMP1AQ9HD42 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.04□□□□□ -2.58
CHMP1AQ9HD42 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.05□□□□□ -2.58
CHMP1AQ9HD42 MIR4636-201ENST00000582271 80 ntBASIC-1.05□□□□□ -2.58
CHMP1AQ9HD42 AC108676.2-201ENST00000605225 163 ntBASIC-1.05□□□□□ -2.58
CHMP1AQ9HD42 RNU6-979P-201ENST00000383896 107 ntBASIC-1.06□□□□□ -2.58
CHMP1AQ9HD42 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
CHMP1AQ9HD42 MIR4484-201ENST00000582855 83 ntBASIC-1.06□□□□□ -2.58
CHMP1AQ9HD42 RNU6-604P-201ENST00000390917 100 ntBASIC-1.07□□□□□ -2.58
CHMP1AQ9HD42 MIR1297-201ENST00000637311 77 ntBASIC-1.07□□□□□ -2.58
CHMP1AQ9HD42 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.08□□□□□ -2.58
CHMP1AQ9HD42 RNU6-924P-201ENST00000362926 108 ntBASIC-1.08□□□□□ -2.58
CHMP1AQ9HD42 SNORD114-17-201ENST00000364699 75 ntBASIC-1.08□□□□□ -2.58
CHMP1AQ9HD42 MIR604-201ENST00000384880 94 ntBASIC-1.08□□□□□ -2.58
CHMP1AQ9HD42 SNORD45.1-201ENST00000363181 77 ntBASIC-1.09□□□□□ -2.58
CHMP1AQ9HD42 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.09□□□□□ -2.58
CHMP1AQ9HD42 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.09□□□□□ -2.58
CHMP1AQ9HD42 RNU6-807P-201ENST00000516805 107 ntBASIC-1.09□□□□□ -2.58
CHMP1AQ9HD42 MIR548AG1-201ENST00000579932 66 ntBASIC-1.09□□□□□ -2.58
CHMP1AQ9HD42 RNU6-315P-201ENST00000362666 107 ntBASIC-1.1□□□□□ -2.59
CHMP1AQ9HD42 RNU6-982P-201ENST00000516216 102 ntBASIC-1.1□□□□□ -2.59
CHMP1AQ9HD42 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.1□□□□□ -2.59
CHMP1AQ9HD42 SNORD114-25-201ENST00000363742 72 ntBASIC-1.11□□□□□ -2.59
CHMP1AQ9HD42 RNU6-380P-201ENST00000410207 107 ntBASIC-1.11□□□□□ -2.59
CHMP1AQ9HD42 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
CHMP1AQ9HD42 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.12□□□□□ -2.59
CHMP1AQ9HD42 RNU6-431P-201ENST00000383874 107 ntBASIC-1.12□□□□□ -2.59
CHMP1AQ9HD42 MIR147A-201ENST00000385079 72 ntBASIC-1.12□□□□□ -2.59
CHMP1AQ9HD42 RNU7-171P-201ENST00000459581 62 ntBASIC-1.12□□□□□ -2.59
CHMP1AQ9HD42 MIR548C-201ENST00000384815 97 ntBASIC-1.13□□□□□ -2.59
CHMP1AQ9HD42 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms