Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.02□□□□□ -2.25
USB1Q9BQ65 RNA5SP128-201ENST00000365305 116 ntBASIC1.01□□□□□ -2.25
USB1Q9BQ65 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
USB1Q9BQ65 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
USB1Q9BQ65 MIR548X-201ENST00000580069 75 ntBASIC1□□□□□ -2.25
USB1Q9BQ65 MIR3925-201ENST00000584674 77 ntBASIC1□□□□□ -2.25
USB1Q9BQ65 MIR499B-201ENST00000636498 73 ntBASIC0.99□□□□□ -2.25
USB1Q9BQ65 PSMC1P5-201ENST00000512850 177 ntBASIC0.98□□□□□ -2.25
USB1Q9BQ65 RNU7-129P-201ENST00000516128 62 ntBASIC0.98□□□□□ -2.25
USB1Q9BQ65 AL353803.5-201ENST00000599815 141 ntBASIC0.98□□□□□ -2.25
USB1Q9BQ65 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
USB1Q9BQ65 Y_RNA.224-201ENST00000364308 111 ntBASIC0.97□□□□□ -2.25
USB1Q9BQ65 MIR876-201ENST00000401147 81 ntBASIC0.97□□□□□ -2.25
USB1Q9BQ65 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
USB1Q9BQ65 Y_RNA.226-201ENST00000364337 114 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 RNU6-35P-201ENST00000384530 107 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 MIR1287-201ENST00000408492 90 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 RNA5SP102-201ENST00000516865 106 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 AP000676.1-201ENST00000533307 52 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
USB1Q9BQ65 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.95□□□□□ -2.26
USB1Q9BQ65 RNU6-863P-201ENST00000515989 104 ntBASIC0.95□□□□□ -2.26
USB1Q9BQ65 MIR4490-201ENST00000582647 84 ntBASIC0.94□□□□□ -2.26
USB1Q9BQ65 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
USB1Q9BQ65 SCARNA11.2-201ENST00000517183 154 ntBASIC0.93□□□□□ -2.26
USB1Q9BQ65 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
USB1Q9BQ65 SNORD115-23-201ENST00000364461 82 ntBASIC0.92□□□□□ -2.26
USB1Q9BQ65 MIR106A-201ENST00000384870 81 ntBASIC0.92□□□□□ -2.26
USB1Q9BQ65 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.92□□□□□ -2.26
USB1Q9BQ65 RNU6-598P-201ENST00000364017 105 ntBASIC0.91□□□□□ -2.26
USB1Q9BQ65 RNU6-930P-201ENST00000390938 100 ntBASIC0.91□□□□□ -2.26
USB1Q9BQ65 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
USB1Q9BQ65 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
USB1Q9BQ65 SNORD44.1-201ENST00000363202 61 ntBASIC0.9□□□□□ -2.27
USB1Q9BQ65 snoR1.1-201ENST00000628177 80 ntBASIC0.9□□□□□ -2.27
USB1Q9BQ65 MIR579-201ENST00000385221 98 ntBASIC0.89□□□□□ -2.27
USB1Q9BQ65 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
USB1Q9BQ65 AC108676.2-201ENST00000605225 163 ntBASIC0.88□□□□□ -2.27
USB1Q9BQ65 MIR6734-201ENST00000621166 68 ntBASIC0.88□□□□□ -2.27
USB1Q9BQ65 SNORD114-27-201ENST00000363766 70 ntBASIC0.87□□□□□ -2.27
USB1Q9BQ65 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
USB1Q9BQ65 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
USB1Q9BQ65 RNU6-945P-201ENST00000383947 107 ntBASIC0.87□□□□□ -2.27
USB1Q9BQ65 U2.18-201ENST00000622185 84 ntBASIC0.87□□□□□ -2.27
USB1Q9BQ65 RNU7-151P-201ENST00000516930 53 ntBASIC0.86□□□□□ -2.27
USB1Q9BQ65 RNU6-419P-201ENST00000517030 63 ntBASIC0.86□□□□□ -2.27
USB1Q9BQ65 MIR4432-201ENST00000581823 84 ntBASIC0.86□□□□□ -2.27
USB1Q9BQ65 RNA5SP98-201ENST00000363158 137 ntBASIC0.85□□□□□ -2.27
USB1Q9BQ65 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
USB1Q9BQ65 RNA5SP220-201ENST00000516298 104 ntBASIC0.85□□□□□ -2.27
USB1Q9BQ65 RNU7-160P-201ENST00000516660 62 ntBASIC0.85□□□□□ -2.27
USB1Q9BQ65 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
USB1Q9BQ65 MIR96-201ENST00000362288 78 ntBASIC0.83□□□□□ -2.28
USB1Q9BQ65 Y_RNA.118-201ENST00000363300 101 ntBASIC0.83□□□□□ -2.28
USB1Q9BQ65 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
USB1Q9BQ65 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
USB1Q9BQ65 RNU6-42P-201ENST00000384165 107 ntBASIC0.82□□□□□ -2.28
USB1Q9BQ65 RNU6-1262P-201ENST00000516217 96 ntBASIC0.82□□□□□ -2.28
USB1Q9BQ65 RPS29P1-201ENST00000465274 159 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 AC108740.1-201ENST00000498629 225 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 RNU6-1206P-201ENST00000516339 103 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 Y_RNA.698-201ENST00000516798 118 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 uc_338.17-201ENST00000619633 179 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 MIR6767-201ENST00000637302 66 ntBASIC0.81□□□□□ -2.28
USB1Q9BQ65 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
USB1Q9BQ65 MIR548AA1-201ENST00000384971 97 ntBASIC0.8□□□□□ -2.28
USB1Q9BQ65 RNU6-696P-201ENST00000390834 107 ntBASIC0.8□□□□□ -2.28
USB1Q9BQ65 RNU6-995P-201ENST00000391244 107 ntBASIC0.8□□□□□ -2.28
USB1Q9BQ65 MIR548F3-201ENST00000408509 87 ntBASIC0.8□□□□□ -2.28
USB1Q9BQ65 MIR103A1-201ENST00000362165 78 ntBASIC0.79□□□□□ -2.28
USB1Q9BQ65 Y_RNA.69-201ENST00000362885 109 ntBASIC0.79□□□□□ -2.28
USB1Q9BQ65 SNORA68.3-201ENST00000515906 83 ntBASIC0.79□□□□□ -2.28
USB1Q9BQ65 RNU6-838P-201ENST00000363399 108 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 RNU6-127P-201ENST00000390897 107 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 RNU6-1133P-201ENST00000410963 100 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 snoU13.18-201ENST00000459483 104 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 uc_338.36-201ENST00000622331 158 ntBASIC0.78□□□□□ -2.28
USB1Q9BQ65 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
USB1Q9BQ65 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
USB1Q9BQ65 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
USB1Q9BQ65 AL391099.1-201ENST00000624635 187 ntBASIC0.77□□□□□ -2.29
USB1Q9BQ65 MIR373-201ENST00000362273 69 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 SNORA62.4-201ENST00000365504 151 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
USB1Q9BQ65 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 U7.5-201ENST00000517224 61 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 MIR6888-201ENST00000621977 67 ntBASIC0.76□□□□□ -2.29
USB1Q9BQ65 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
USB1Q9BQ65 RNU6-924P-201ENST00000362926 108 ntBASIC0.75□□□□□ -2.29
USB1Q9BQ65 MIR329-2-201ENST00000385029 84 ntBASIC0.75□□□□□ -2.29
USB1Q9BQ65 RNU7-88P-201ENST00000458752 63 ntBASIC0.75□□□□□ -2.29
USB1Q9BQ65 RNU7-55P-201ENST00000459426 62 ntBASIC0.75□□□□□ -2.29
USB1Q9BQ65 MIR4464-201ENST00000580818 92 ntBASIC0.75□□□□□ -2.29
USB1Q9BQ65 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
USB1Q9BQ65 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
USB1Q9BQ65 RNU6-815P-201ENST00000384080 113 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms