Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU5F-1-201ENST00000362507 117 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 RNA5SP173-201ENST00000364857 136 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 RNU6-455P-201ENST00000384681 107 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CDX2Q99626 AL691482.2-201ENST00000457453 84 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 SCARNA18B-201ENST00000458806 135 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 RNU7-171P-201ENST00000459581 62 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 RNA5SP169-201ENST00000517268 117 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 MIR6773-201ENST00000612812 74 ntBASIC-0.07□□□□□ -2.42
CDX2Q99626 SNORD115-25-201ENST00000362619 82 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 SNORD115-37-201ENST00000363768 82 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 SNORA63.6-201ENST00000364921 119 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 MIR216B-201ENST00000390186 82 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 RNU6-129P-201ENST00000391022 107 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 MIR892B-201ENST00000401279 77 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 RNY4P29-201ENST00000410801 97 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 AC074348.1-201ENST00000426503 132 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 AC021146.9-201ENST00000512503 156 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 RNU6-982P-201ENST00000516216 102 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 RNU6-881P-201ENST00000516813 102 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 YWHAEP3-201ENST00000582767 121 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 AC006254.2-201ENST00000603259 279 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 AL590491.3-201ENST00000610731 82 ntBASIC-0.08□□□□□ -2.42
CDX2Q99626 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.08□□□□□ -2.42
CDX2Q99626 SNORD114-28-201ENST00000363610 72 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 SNORD114-11-201ENST00000363738 75 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 RNU6-686P-201ENST00000364839 107 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 SNORD114-12-201ENST00000365400 75 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 MIR450A2-201ENST00000385022 100 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 RNA5SP451-201ENST00000410588 110 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 AL445193.1-201ENST00000441183 141 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 RNU6-557P-201ENST00000516842 110 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 MIR548AX-201ENST00000580117 73 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 MIR4743-201ENST00000584576 69 ntBASIC-0.09□□□□□ -2.42
CDX2Q99626 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.1□□□□□ -2.43
CDX2Q99626 MIR148A-201ENST00000362215 68 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 RNU6-228P-201ENST00000362700 106 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 RNU7-55P-201ENST00000459426 62 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 SNORD38.3-201ENST00000516599 73 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 RNU6-656P-201ENST00000516785 107 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 MIR4666B-201ENST00000578142 81 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 MIR4280-201ENST00000582178 76 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 MIR4712-201ENST00000583750 82 ntBASIC-0.1□□□□□ -2.43
CDX2Q99626 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 MIR224-201ENST00000384889 81 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 MIRLET7B-201ENST00000385140 83 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CDX2Q99626 RNU6-604P-201ENST00000390917 100 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 RNA5SP225-201ENST00000410874 135 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 SNORD57-201ENST00000448188 72 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 RNU6-274P-201ENST00000459566 107 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 AC114755.3-201ENST00000481111 251 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
CDX2Q99626 SNORA2.1-201ENST00000363089 137 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 SNORD114-4-201ENST00000363962 75 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 SNORA8.1-201ENST00000384250 140 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 MIR1255A-201ENST00000408338 113 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 MIR1255B2-201ENST00000408618 67 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 RNU6-303P-201ENST00000517091 106 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 CYP3A54P-201ENST00000566950 75 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 MIR3134-201ENST00000579433 74 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 MIR4464-201ENST00000580818 92 ntBASIC-0.12□□□□□ -2.43
CDX2Q99626 SNORD45.1-201ENST00000363181 77 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 SNORD115-22-201ENST00000364456 82 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 SNORD115-23-201ENST00000364461 82 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 RNU6-900P-201ENST00000384498 102 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 SNORD45A-201ENST00000384512 84 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 SNORA26.2-201ENST00000390922 122 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.13□□□□□ -2.43
CDX2Q99626 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.13□□□□□ -2.43
CDX2Q99626 MIR6739-201ENST00000622461 75 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 MIR1245B-201ENST00000636115 69 ntBASIC-0.13□□□□□ -2.43
CDX2Q99626 RNU6-645P-201ENST00000364649 106 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 SNORD115-31-201ENST00000365318 82 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 RNU6-820P-201ENST00000384273 107 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 MIR519A2-201ENST00000384990 87 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 MIR889-201ENST00000401280 79 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 SNORD4A-201ENST00000459174 72 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 MIR3675-201ENST00000583661 73 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 MIR6888-201ENST00000621977 67 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 AL391099.1-201ENST00000624635 187 ntBASIC-0.14□□□□□ -2.43
CDX2Q99626 MIR521-2-201ENST00000384818 87 ntBASIC-0.15□□□□□ -2.43
CDX2Q99626 RNY1P9-201ENST00000532431 109 ntBASIC-0.15□□□□□ -2.43
CDX2Q99626 U2.7-201ENST00000619197 100 ntBASIC-0.15□□□□□ -2.43
CDX2Q99626 MIR4788-201ENST00000639104 80 ntBASIC-0.15□□□□□ -2.43
CDX2Q99626 RNU6-315P-201ENST00000362666 107 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 SNORA18.1-201ENST00000363418 128 ntBASIC-0.16□□□□□ -2.44
CDX2Q99626 RNU6-973P-201ENST00000364690 107 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms