Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.12□□□□□ -2.43
ZIM3Q96PE6 MIR193B-201ENST00000384907 83 ntBASIC-0.12□□□□□ -2.43
ZIM3Q96PE6 RNU6-687P-201ENST00000516443 89 ntBASIC-0.12□□□□□ -2.43
ZIM3Q96PE6 MIR548AG1-201ENST00000579932 66 ntBASIC-0.12□□□□□ -2.43
ZIM3Q96PE6 SNORD115-31-201ENST00000365318 82 ntBASIC-0.13□□□□□ -2.43
ZIM3Q96PE6 AC096531.1-201ENST00000419107 107 ntBASIC-0.13□□□□□ -2.43
ZIM3Q96PE6 RNU6-807P-201ENST00000516805 107 ntBASIC-0.13□□□□□ -2.43
ZIM3Q96PE6 MIR4464-201ENST00000580818 92 ntBASIC-0.13□□□□□ -2.43
ZIM3Q96PE6 MIR4280-201ENST00000582178 76 ntBASIC-0.13□□□□□ -2.43
ZIM3Q96PE6 SNORD45.1-201ENST00000363181 77 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 SNORD45A-201ENST00000384512 84 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 CYP3A54P-201ENST00000566950 75 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 MIR5704-201ENST00000584029 77 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 MIR8068-201ENST00000618032 68 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 U2.7-201ENST00000619197 100 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.14□□□□□ -2.43
ZIM3Q96PE6 MIR330-201ENST00000362196 94 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 RNU6-973P-201ENST00000364690 107 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 SNORD116-24-201ENST00000384549 92 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 AC114755.3-201ENST00000481111 251 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 U6.96-201ENST00000636425 70 ntBASIC-0.15□□□□□ -2.43
ZIM3Q96PE6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.16□□□□□ -2.43
ZIM3Q96PE6 SNORD113.1-201ENST00000363280 73 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 RNU6-24P-201ENST00000384440 107 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 MIR1255B2-201ENST00000408618 67 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 SNORD4A-201ENST00000459174 72 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 RNU6-70P-201ENST00000516438 60 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 MIR1273G-201ENST00000577677 100 ntBASIC-0.16□□□□□ -2.44
ZIM3Q96PE6 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 RNU6-587P-201ENST00000391282 106 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 MIR3666-201ENST00000607845 111 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 uc_338.36-201ENST00000622331 158 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 AL391099.1-201ENST00000624635 187 ntBASIC-0.17□□□□□ -2.44
ZIM3Q96PE6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 MIR519A2-201ENST00000384990 87 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 RNU7-174P-201ENST00000516248 59 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 SNORA72.7-201ENST00000516349 94 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 MIR8087-201ENST00000612745 78 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
ZIM3Q96PE6 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.19□□□□□ -2.44
ZIM3Q96PE6 MIR4432-201ENST00000581823 84 ntBASIC-0.19□□□□□ -2.44
ZIM3Q96PE6 MIR889-201ENST00000401280 79 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 RNU6-380P-201ENST00000410207 107 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 AL353803.5-201ENST00000599815 141 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 U7.4-201ENST00000614961 63 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 AL109933.3-201ENST00000619095 188 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 U4.4-201ENST00000620626 117 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 RNU6-540P-201ENST00000384622 101 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 MIR1197-201ENST00000408818 88 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 MIR8053-201ENST00000613344 75 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 MIR6851-201ENST00000617060 67 ntBASIC-0.21□□□□□ -2.44
ZIM3Q96PE6 RNU6-411P-201ENST00000384451 107 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 RNU6-634P-201ENST00000459134 106 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 RNU6-518P-201ENST00000516056 96 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 RNU7-154P-201ENST00000516194 62 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 SNORD38.3-201ENST00000516599 73 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 AL445584.3-201ENST00000617173 78 ntBASIC-0.22□□□□□ -2.44
ZIM3Q96PE6 AL445193.1-201ENST00000441183 141 ntBASIC-0.23□□□□□ -2.45
ZIM3Q96PE6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.23□□□□□ -2.45
ZIM3Q96PE6 MIR4788-201ENST00000639104 80 ntBASIC-0.23□□□□□ -2.45
ZIM3Q96PE6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.24□□□□□ -2.45
ZIM3Q96PE6 MIR6854-201ENST00000614935 69 ntBASIC-0.24□□□□□ -2.45
ZIM3Q96PE6 MIR154-201ENST00000385243 84 ntBASIC-0.25□□□□□ -2.45
ZIM3Q96PE6 RNA5SP470-201ENST00000516463 106 ntBASIC-0.25□□□□□ -2.45
ZIM3Q96PE6 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.26□□□□□ -2.45
ZIM3Q96PE6 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.26□□□□□ -2.45
ZIM3Q96PE6 RNU6-246P-201ENST00000384702 107 ntBASIC-0.26□□□□□ -2.45
ZIM3Q96PE6 AL021921.1-201ENST00000442774 93 ntBASIC-0.26□□□□□ -2.45
ZIM3Q96PE6 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 RNU6-776P-201ENST00000364403 104 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 MIR489-201ENST00000384923 84 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.27□□□□□ -2.45
ZIM3Q96PE6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 RNU6-901P-201ENST00000384593 106 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms