Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 AL691482.2-201ENST00000457453 84 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 AC021146.9-201ENST00000512503 156 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 RNA5SP180-201ENST00000516181 101 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 MIR6509-201ENST00000614603 85 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
CCDC138Q96M89 RNU6-640P-201ENST00000363693 105 ntBASIC-0.64□□□□□ -2.51
CCDC138Q96M89 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.64□□□□□ -2.51
CCDC138Q96M89 RNU6-905P-201ENST00000384434 107 ntBASIC-0.64□□□□□ -2.51
CCDC138Q96M89 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.64□□□□□ -2.51
CCDC138Q96M89 RNU6-592P-201ENST00000411333 103 ntBASIC-0.64□□□□□ -2.51
CCDC138Q96M89 RNU6-208P-201ENST00000362431 107 ntBASIC-0.65□□□□□ -2.51
CCDC138Q96M89 snoU13.13-201ENST00000458842 104 ntBASIC-0.65□□□□□ -2.51
CCDC138Q96M89 AC093729.1-201ENST00000513074 128 ntBASIC-0.65□□□□□ -2.51
CCDC138Q96M89 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.66□□□□□ -2.52
CCDC138Q96M89 SNORD77.2-201ENST00000391045 68 ntBASIC-0.66□□□□□ -2.52
CCDC138Q96M89 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.66□□□□□ -2.52
CCDC138Q96M89 MIR6773-201ENST00000612812 74 ntBASIC-0.66□□□□□ -2.52
CCDC138Q96M89 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.66□□□□□ -2.52
CCDC138Q96M89 RNU6-284P-201ENST00000411105 106 ntBASIC-0.67□□□□□ -2.52
CCDC138Q96M89 AC093726.3-201ENST00000637588 150 ntBASIC-0.67□□□□□ -2.52
CCDC138Q96M89 RNU6-681P-201ENST00000364012 104 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 RNA5SP192-201ENST00000364404 120 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 RNU6-973P-201ENST00000364690 107 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 MIR488-201ENST00000365739 83 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 SNORD56B-201ENST00000384713 71 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 RNU6-402P-201ENST00000410678 103 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 AL445193.1-201ENST00000441183 141 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 AC114755.3-201ENST00000481111 251 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.68□□□□□ -2.52
CCDC138Q96M89 RNU6-219P-201ENST00000364728 107 ntBASIC-0.69□□□□□ -2.52
CCDC138Q96M89 SNORA2.1-201ENST00000363089 137 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 MIR203A-201ENST00000384836 110 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 RNU6-168P-201ENST00000516189 101 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 RNU6-752P-201ENST00000516376 102 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 MIR3657-201ENST00000584818 117 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 U6.96-201ENST00000636425 70 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.7□□□□□ -2.52
CCDC138Q96M89 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.71□□□□□ -2.52
CCDC138Q96M89 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.71□□□□□ -2.52
CCDC138Q96M89 RNU6-340P-201ENST00000364005 107 ntBASIC-0.72□□□□□ -2.52
CCDC138Q96M89 MIR4280-201ENST00000582178 76 ntBASIC-0.72□□□□□ -2.52
CCDC138Q96M89 snoR1.1-201ENST00000628177 80 ntBASIC-0.72□□□□□ -2.52
CCDC138Q96M89 MIRLET7B-201ENST00000385140 83 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 MIR196A1-201ENST00000388006 70 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 RNU6-337P-201ENST00000391243 106 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 RNA5SP147-201ENST00000516493 109 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 MIR4432-201ENST00000581823 84 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 YWHAEP3-201ENST00000582767 121 ntBASIC-0.73□□□□□ -2.53
CCDC138Q96M89 RNU6-624P-201ENST00000363411 107 ntBASIC-0.74□□□□□ -2.53
CCDC138Q96M89 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.74□□□□□ -2.53
CCDC138Q96M89 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.74□□□□□ -2.53
CCDC138Q96M89 RNU6-267P-201ENST00000516714 103 ntBASIC-0.74□□□□□ -2.53
CCDC138Q96M89 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.75□□□□□ -2.53
CCDC138Q96M89 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.75□□□□□ -2.53
CCDC138Q96M89 AC140658.3-201ENST00000567603 271 ntBASIC-0.75□□□□□ -2.53
CCDC138Q96M89 MIR548BB-201ENST00000626714 66 ntBASIC-0.75□□□□□ -2.53
CCDC138Q96M89 RNU6-497P-201ENST00000365316 104 ntBASIC-0.76□□□□□ -2.53
CCDC138Q96M89 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.76□□□□□ -2.53
CCDC138Q96M89 RNA5SP89-201ENST00000410300 108 ntBASIC-0.76□□□□□ -2.53
CCDC138Q96M89 RNU6-844P-201ENST00000517175 102 ntBASIC-0.76□□□□□ -2.53
CCDC138Q96M89 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
CCDC138Q96M89 MIR204-201ENST00000385200 110 ntBASIC-0.77□□□□□ -2.53
CCDC138Q96M89 MIR4436A-201ENST00000585278 85 ntBASIC-0.77□□□□□ -2.53
CCDC138Q96M89 MIR6851-201ENST00000617060 67 ntBASIC-0.77□□□□□ -2.53
CCDC138Q96M89 RNU6-24P-201ENST00000384440 107 ntBASIC-0.78□□□□□ -2.53
CCDC138Q96M89 RNA5SP169-201ENST00000517268 117 ntBASIC-0.78□□□□□ -2.53
CCDC138Q96M89 MIR3165-201ENST00000579874 75 ntBASIC-0.78□□□□□ -2.53
CCDC138Q96M89 RNU6-675P-201ENST00000384236 104 ntBASIC-0.79□□□□□ -2.54
CCDC138Q96M89 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.79□□□□□ -2.54
CCDC138Q96M89 RNA5SP470-201ENST00000516463 106 ntBASIC-0.79□□□□□ -2.54
CCDC138Q96M89 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.8□□□□□ -2.54
CCDC138Q96M89 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.8□□□□□ -2.54
CCDC138Q96M89 RNU6-557P-201ENST00000516842 110 ntBASIC-0.8□□□□□ -2.54
CCDC138Q96M89 SNORD115-23-201ENST00000364461 82 ntBASIC-0.81□□□□□ -2.54
CCDC138Q96M89 RNY4P7-201ENST00000364600 96 ntBASIC-0.81□□□□□ -2.54
CCDC138Q96M89 SNORD38.3-201ENST00000516599 73 ntBASIC-0.81□□□□□ -2.54
CCDC138Q96M89 RNU6-153P-201ENST00000364422 104 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 SNORA13-201ENST00000458790 133 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 MIR6854-201ENST00000614935 69 ntBASIC-0.82□□□□□ -2.54
CCDC138Q96M89 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.83□□□□□ -2.54
CCDC138Q96M89 SNORA33.1-201ENST00000364957 130 ntBASIC-0.83□□□□□ -2.54
CCDC138Q96M89 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
CCDC138Q96M89 MIR5704-201ENST00000584029 77 ntBASIC-0.83□□□□□ -2.54
CCDC138Q96M89 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
CCDC138Q96M89 SNORA3B-201ENST00000391305 131 ntBASIC-0.84□□□□□ -2.54
CCDC138Q96M89 MIR6739-201ENST00000622461 75 ntBASIC-0.85□□□□□ -2.55
CCDC138Q96M89 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.85□□□□□ -2.55
CCDC138Q96M89 MIR1246-201ENST00000636535 73 ntBASIC-0.85□□□□□ -2.55
CCDC138Q96M89 AC006160.2-201ENST00000637708 154 ntBASIC-0.85□□□□□ -2.55
CCDC138Q96M89 RNU6-686P-201ENST00000364839 107 ntBASIC-0.86□□□□□ -2.55
CCDC138Q96M89 MIR518B-201ENST00000385127 83 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 290.9 ms