Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC108676.2-201ENST00000605225 163 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 RNA5SP26-201ENST00000362406 119 ntBASIC-0.87□□□□□ -2.55
RPUSD4Q96CM3 SNORD113-1-201ENST00000365321 69 ntBASIC-0.87□□□□□ -2.55
RPUSD4Q96CM3 MT-TQ-201ENST00000387372 72 ntBASIC-0.87□□□□□ -2.55
RPUSD4Q96CM3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 MIR521-2-201ENST00000384818 87 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 MIR519A2-201ENST00000384990 87 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 MIR6739-201ENST00000622461 75 ntBASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.88□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 MIR519C-201ENST00000385053 87 ntBASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 AL450471.1-201ENST00000447509 127 ntBASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 RNU6-162P-201ENST00000516228 103 ntBASIC-0.89□□□□□ -2.55
RPUSD4Q96CM3 RNU6-340P-201ENST00000364005 107 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 RNU6-681P-201ENST00000364012 104 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 SNORD19-201ENST00000391191 68 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 MIR889-201ENST00000401280 79 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 RNU6-313P-201ENST00000516317 112 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 RNU7-153P-201ENST00000516455 62 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 snoU83B.1-201ENST00000517136 88 ntBASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
RPUSD4Q96CM3 RNU6-633P-201ENST00000362612 103 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 RNU6-246P-201ENST00000384702 107 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 MIR6818-201ENST00000621576 65 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 AC132825.6-201ENST00000638861 357 ntBASIC-0.91□□□□□ -2.56
RPUSD4Q96CM3 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 SNORD115-27-201ENST00000364430 82 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 SNORD77.2-201ENST00000391045 68 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 SNORA26.4-201ENST00000391188 123 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 MIR1265-201ENST00000408444 86 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 RNY1P9-201ENST00000532431 109 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 MIR3910-1-201ENST00000580936 111 ntBASIC-0.92□□□□□ -2.56
RPUSD4Q96CM3 AL031737.1-201ENST00000450125 223 ntBASIC-0.93□□□□□ -2.56
RPUSD4Q96CM3 RNU7-88P-201ENST00000458752 63 ntBASIC-0.93□□□□□ -2.56
RPUSD4Q96CM3 RNU7-154P-201ENST00000516194 62 ntBASIC-0.93□□□□□ -2.56
RPUSD4Q96CM3 MIR4306-201ENST00000583390 91 ntBASIC-0.93□□□□□ -2.56
RPUSD4Q96CM3 MIR6874-201ENST00000635894 71 ntBASIC-0.93□□□□□ -2.56
RPUSD4Q96CM3 RNU6-755P-201ENST00000364400 103 ntBASIC-0.94□□□□□ -2.56
RPUSD4Q96CM3 RNU6-35P-201ENST00000384530 107 ntBASIC-0.94□□□□□ -2.56
RPUSD4Q96CM3 RPL35AP4-201ENST00000412007 102 ntBASIC-0.94□□□□□ -2.56
RPUSD4Q96CM3 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
RPUSD4Q96CM3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.94□□□□□ -2.56
RPUSD4Q96CM3 RNU6-624P-201ENST00000363411 107 ntBASIC-0.95□□□□□ -2.56
RPUSD4Q96CM3 RNU6-518P-201ENST00000516056 96 ntBASIC-0.95□□□□□ -2.56
RPUSD4Q96CM3 MIR4668-201ENST00000582284 70 ntBASIC-0.95□□□□□ -2.56
RPUSD4Q96CM3 AC091912.2-201ENST00000624798 167 ntBASIC-0.95□□□□□ -2.56
RPUSD4Q96CM3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 RNU6-497P-201ENST00000365316 104 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 RNU6-24P-201ENST00000384440 107 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 RNY4P18-201ENST00000391107 89 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 U7.5-201ENST00000517224 61 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 AP001318.4-201ENST00000616637 121 ntBASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.96□□□□□ -2.56
RPUSD4Q96CM3 SNORD115-33-201ENST00000363723 82 ntBASIC-0.97□□□□□ -2.56
RPUSD4Q96CM3 SNORD115-37-201ENST00000363768 82 ntBASIC-0.97□□□□□ -2.56
RPUSD4Q96CM3 MIR29B1-201ENST00000385015 81 ntBASIC-0.97□□□□□ -2.56
RPUSD4Q96CM3 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.97□□□□□ -2.56
RPUSD4Q96CM3 RNU6-656P-201ENST00000516785 107 ntBASIC-0.97□□□□□ -2.56
RPUSD4Q96CM3 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.98□□□□□ -2.57
RPUSD4Q96CM3 MIR507-201ENST00000385234 94 ntBASIC-0.98□□□□□ -2.57
RPUSD4Q96CM3 RNU6-732P-201ENST00000516033 103 ntBASIC-0.98□□□□□ -2.57
RPUSD4Q96CM3 RNU6-557P-201ENST00000516842 110 ntBASIC-0.98□□□□□ -2.57
RPUSD4Q96CM3 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.98□□□□□ -2.57
RPUSD4Q96CM3 RNU6-924P-201ENST00000362926 108 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 AL035461.1-201ENST00000421490 332 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 AC093729.1-201ENST00000513074 128 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 SNORA40.13-201ENST00000516379 120 ntBASIC-0.99□□□□□ -2.57
RPUSD4Q96CM3 SNORD116-22-201ENST00000384430 92 ntBASIC-1□□□□□ -2.57
RPUSD4Q96CM3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1□□□□□ -2.57
RPUSD4Q96CM3 MALAT1.1-201ENST00000618249 95 ntBASIC-1□□□□□ -2.57
RPUSD4Q96CM3 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
RPUSD4Q96CM3 MIR450A1-201ENST00000362262 91 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 RNU6-219P-201ENST00000364728 107 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 MIR527-201ENST00000385244 85 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 RNA5SP25-201ENST00000410815 110 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 AL021921.1-201ENST00000442774 93 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 AC090616.4-201ENST00000448026 115 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
RPUSD4Q96CM3 RNU6-330P-201ENST00000363015 107 ntBASIC-1.02□□□□□ -2.57
RPUSD4Q96CM3 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.02□□□□□ -2.57
RPUSD4Q96CM3 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.02□□□□□ -2.57
RPUSD4Q96CM3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.02□□□□□ -2.57
RPUSD4Q96CM3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.02□□□□□ -2.57
RPUSD4Q96CM3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.03□□□□□ -2.57
RPUSD4Q96CM3 MIR520D-201ENST00000385002 87 ntBASIC-1.03□□□□□ -2.57
RPUSD4Q96CM3 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.03□□□□□ -2.57
RPUSD4Q96CM3 AL353691.2-201ENST00000443795 59 ntBASIC-1.03□□□□□ -2.57
RPUSD4Q96CM3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms