Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 snoU13.19-201ENST00000459148 104 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORA49-201ENST00000386157 136 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORD78.1-201ENST00000390866 65 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 Z95118.1-201ENST00000421372 247 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORA40.17-201ENST00000517256 115 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 MIR1295B-201ENST00000636144 60 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 RNU6-330P-201ENST00000363015 107 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 MIR1255A-201ENST00000408338 113 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 AL627230.5-201ENST00000619807 58 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 U6.96-201ENST00000636425 70 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 RNU6-228P-201ENST00000362700 106 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 MIR6507-201ENST00000613630 70 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 MIR521-2-201ENST00000384818 87 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 MIR4493-201ENST00000584016 73 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 AC145423.2-201ENST00000610631 239 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 U7.4-201ENST00000614961 63 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 MIR6739-201ENST00000622461 75 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.08□□□□□ -2.42
CTHRC1Q96CG8 RNU6-279P-201ENST00000391297 101 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 AC244250.2-201ENST00000418731 148 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 RNU6-70P-201ENST00000516438 60 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 MIR8053-201ENST00000613344 75 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 MIR604-201ENST00000384880 94 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 RNU6-857P-201ENST00000515893 110 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 MIR6773-201ENST00000612812 74 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 SNORD49B-201ENST00000365172 72 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 AC108676.2-201ENST00000605225 163 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 uc_338.36-201ENST00000622331 158 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 AC090617.8-201ENST00000623339 167 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 MIR655-201ENST00000362159 97 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR9-2-201ENST00000384838 87 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR664A-201ENST00000626086 82 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 snoR1.1-201ENST00000628177 80 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR101-1-201ENST00000362265 75 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 MIR154-201ENST00000385243 84 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 RNU6-411P-201ENST00000384451 107 ntBASIC-0.16□□□□□ -2.44
CTHRC1Q96CG8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MIRLET7B-201ENST00000385140 83 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP225-201ENST00000410874 135 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MTND4LP1-201ENST00000446263 157 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MIR3134-201ENST00000579433 74 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 SNORD95.1-201ENST00000364099 68 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 SNORD115-22-201ENST00000364456 82 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU6-587P-201ENST00000391282 106 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 AL445193.1-201ENST00000441183 141 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP67-201ENST00000516422 131 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 AL391099.1-201ENST00000624635 187 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 MIR4662A-201ENST00000637499 67 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 SNORD113.1-201ENST00000363280 73 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-895P-201ENST00000384125 103 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 SNORD56B-201ENST00000384713 71 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms