Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-540P-201ENST00000384622 101 ntBASIC-2.12□□□□□ -2.75
CCDC112Q8NEF3 MTND4LP9-201ENST00000427694 174 ntBASIC-2.12□□□□□ -2.75
CCDC112Q8NEF3 MIR3144-201ENST00000579460 79 ntBASIC-2.12□□□□□ -2.75
CCDC112Q8NEF3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.12□□□□□ -2.75
CCDC112Q8NEF3 MIR1236-201ENST00000408340 102 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 AL450471.1-201ENST00000447509 127 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.13□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.14□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.14□□□□□ -2.75
CCDC112Q8NEF3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.14□□□□□ -2.75
CCDC112Q8NEF3 RNU6-426P-201ENST00000516464 97 ntBASIC-2.14□□□□□ -2.75
CCDC112Q8NEF3 RNU6-807P-201ENST00000516805 107 ntBASIC-2.14□□□□□ -2.75
CCDC112Q8NEF3 RNU6-200P-201ENST00000364743 107 ntBASIC-2.15□□□□□ -2.75
CCDC112Q8NEF3 SCARNA23-201ENST00000516060 130 ntBASIC-2.15□□□□□ -2.75
CCDC112Q8NEF3 SNORD116-10-201ENST00000363791 102 ntBASIC-2.16□□□□□ -2.76
CCDC112Q8NEF3 RNU6-478P-201ENST00000363904 110 ntBASIC-2.16□□□□□ -2.76
CCDC112Q8NEF3 MIR548Q-201ENST00000408404 100 ntBASIC-2.16□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.16□□□□□ -2.76
CCDC112Q8NEF3 MIR4503-201ENST00000582187 83 ntBASIC-2.16□□□□□ -2.76
CCDC112Q8NEF3 RNU6-681P-201ENST00000364012 104 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 AC018880.2-201ENST00000414265 201 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 AL035461.1-201ENST00000421490 332 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 RNU7-107P-201ENST00000459121 61 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 AC004792.1-201ENST00000614523 137 ntBASIC-2.17□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNA5SP86-201ENST00000390869 98 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNU6-400P-201ENST00000391173 106 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNU6-904P-201ENST00000516206 101 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNU7-153P-201ENST00000516455 62 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNU6-537P-201ENST00000517277 103 ntBASIC-2.18□□□□□ -2.76
CCDC112Q8NEF3 RNU6-79P-201ENST00000362511 107 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 RNU6-983P-201ENST00000516004 103 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 MIR3914-2-201ENST00000637339 95 ntBASIC-2.19□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.2□□□□□ -2.76
CCDC112Q8NEF3 SNORA63-201ENST00000363450 132 ntBASIC-2.21□□□□□ -2.76
CCDC112Q8NEF3 MIR548H1-201ENST00000408610 102 ntBASIC-2.21□□□□□ -2.76
CCDC112Q8NEF3 SNORD33.1-201ENST00000516213 88 ntBASIC-2.21□□□□□ -2.76
CCDC112Q8NEF3 MTND5P41-201ENST00000517498 206 ntBASIC-2.21□□□□□ -2.76
CCDC112Q8NEF3 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.22□□□□□ -2.76
CCDC112Q8NEF3 RNU6-458P-201ENST00000384179 107 ntBASIC-2.22□□□□□ -2.76
CCDC112Q8NEF3 U6.58-201ENST00000613107 107 ntBASIC-2.22□□□□□ -2.76
CCDC112Q8NEF3 RNU6-645P-201ENST00000364649 106 ntBASIC-2.23□□□□□ -2.77
CCDC112Q8NEF3 RNU6-574P-201ENST00000384265 107 ntBASIC-2.23□□□□□ -2.77
CCDC112Q8NEF3 SNORA40-201ENST00000388090 126 ntBASIC-2.23□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.23□□□□□ -2.77
CCDC112Q8NEF3 RNU6-704P-201ENST00000364162 103 ntBASIC-2.24□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.24□□□□□ -2.77
CCDC112Q8NEF3 MIR548A3-201ENST00000385297 97 ntBASIC-2.24□□□□□ -2.77
CCDC112Q8NEF3 RNU6-696P-201ENST00000390834 107 ntBASIC-2.24□□□□□ -2.77
CCDC112Q8NEF3 AL117351.2-201ENST00000513571 157 ntBASIC-2.24□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.25□□□□□ -2.77
CCDC112Q8NEF3 SNORD115-27-201ENST00000364430 82 ntBASIC-2.25□□□□□ -2.77
CCDC112Q8NEF3 SNORD77.2-201ENST00000391045 68 ntBASIC-2.25□□□□□ -2.77
CCDC112Q8NEF3 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.25□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.26□□□□□ -2.77
CCDC112Q8NEF3 SNORD18.1-201ENST00000363807 70 ntBASIC-2.26□□□□□ -2.77
CCDC112Q8NEF3 RNU6-608P-201ENST00000383927 104 ntBASIC-2.26□□□□□ -2.77
CCDC112Q8NEF3 RNU6-257P-201ENST00000410238 98 ntBASIC-2.26□□□□□ -2.77
CCDC112Q8NEF3 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.26□□□□□ -2.77
CCDC112Q8NEF3 RNU6-196P-201ENST00000384315 107 ntBASIC-2.27□□□□□ -2.77
CCDC112Q8NEF3 RNU6-630P-201ENST00000391258 106 ntBASIC-2.27□□□□□ -2.77
CCDC112Q8NEF3 RNU7-61P-201ENST00000515897 61 ntBASIC-2.27□□□□□ -2.77
CCDC112Q8NEF3 RNU7-174P-201ENST00000516248 59 ntBASIC-2.27□□□□□ -2.77
CCDC112Q8NEF3 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 MIR548C-201ENST00000384815 97 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 RNU6-327P-201ENST00000516270 127 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 U6.95-201ENST00000636931 70 ntBASIC-2.28□□□□□ -2.77
CCDC112Q8NEF3 RNU6-379P-201ENST00000363813 104 ntBASIC-2.29□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.3□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.3□□□□□ -2.78
CCDC112Q8NEF3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.3□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 MIR520D-201ENST00000385002 87 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 RNU6-587P-201ENST00000391282 106 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 AL353621.2-201ENST00000605340 133 ntBASIC-2.31□□□□□ -2.78
CCDC112Q8NEF3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.32□□□□□ -2.78
CCDC112Q8NEF3 RNU6-971P-201ENST00000516920 106 ntBASIC-2.32□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 MIR519C-201ENST00000385053 87 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 MIR23C-201ENST00000579846 100 ntBASIC-2.33□□□□□ -2.78
CCDC112Q8NEF3 RNU6-598P-201ENST00000364017 105 ntBASIC-2.34□□□□□ -2.78
CCDC112Q8NEF3 RNU6-880P-201ENST00000384526 107 ntBASIC-2.34□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 414.9 ms