Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-578P-201ENST00000390980 103 ntBASIC-4.17□□□□□ -3.08
VPS13CQ709C8 RNU6-1050P-201ENST00000410388 107 ntBASIC-4.17□□□□□ -3.08
VPS13CQ709C8 DLEU2_1.2-201ENST00000614667 120 ntBASIC-4.17□□□□□ -3.08
VPS13CQ709C8 MIR548D2-201ENST00000384955 97 ntBASIC-4.18□□□□□ -3.08
VPS13CQ709C8 RNU7-153P-201ENST00000516455 62 ntBASIC-4.18□□□□□ -3.08
VPS13CQ709C8 MIR3662-201ENST00000637030 95 ntBASIC-4.18□□□□□ -3.08
VPS13CQ709C8 RNU6-1252P-201ENST00000363054 104 ntBASIC-4.18□□□□□ -3.08
VPS13CQ709C8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-4.18□□□□□ -3.08
VPS13CQ709C8 MIR3149-201ENST00000584629 83 ntBASIC-4.18□□□□□ -3.08
VPS13CQ709C8 RNU6-307P-201ENST00000516743 106 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 Y_RNA.183-201ENST00000363882 113 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 AL603755.1-201ENST00000619504 163 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 SNORA63.4-201ENST00000362763 126 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 SNORD116-12-201ENST00000384468 92 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 Y_RNA.530-201ENST00000384587 101 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 RNU6-264P-201ENST00000517134 104 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 AP001318.4-201ENST00000616637 121 ntBASIC-4.19□□□□□ -3.08
VPS13CQ709C8 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.2□□□□□ -3.08
VPS13CQ709C8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.2□□□□□ -3.08
VPS13CQ709C8 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.2□□□□□ -3.08
VPS13CQ709C8 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.2□□□□□ -3.08
VPS13CQ709C8 RNU6-593P-201ENST00000364716 112 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 RNU6-537P-201ENST00000517277 103 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 RNU6-89P-201ENST00000606519 100 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 Y_RNA.359-201ENST00000365498 102 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 MIR4801-201ENST00000582704 82 ntBASIC-4.21□□□□□ -3.08
VPS13CQ709C8 AC080013.6-201ENST00000606185 215 ntBASIC-4.22□□□□□ -3.08
VPS13CQ709C8 RNU6-931P-201ENST00000363850 107 ntBASIC-4.22□□□□□ -3.08
VPS13CQ709C8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.22□□□□□ -3.08
VPS13CQ709C8 RNU6-261P-201ENST00000459506 102 ntBASIC-4.22□□□□□ -3.08
VPS13CQ709C8 AP000240.1-201ENST00000609910 452 ntBASIC-4.22□□□□□ -3.08
VPS13CQ709C8 AC006927.3-201ENST00000638789 384 ntBASIC-4.22□□□□□ -3.08
VPS13CQ709C8 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.23□□□□□ -3.09
VPS13CQ709C8 Y_RNA.682-201ENST00000516457 100 ntBASIC-4.23□□□□□ -3.09
VPS13CQ709C8 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.23□□□□□ -3.09
VPS13CQ709C8 RNU7-66P-201ENST00000459469 62 ntBASIC-4.23□□□□□ -3.09
VPS13CQ709C8 Y_RNA.713-201ENST00000517013 96 ntBASIC-4.24□□□□□ -3.09
VPS13CQ709C8 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.24□□□□□ -3.09
VPS13CQ709C8 RNU6-402P-201ENST00000410678 103 ntBASIC-4.24□□□□□ -3.09
VPS13CQ709C8 MIR6128-201ENST00000615528 109 ntBASIC-4.24□□□□□ -3.09
VPS13CQ709C8 RNU6-937P-201ENST00000384325 106 ntBASIC-4.25□□□□□ -3.09
VPS13CQ709C8 SNORD45A-201ENST00000384512 84 ntBASIC-4.25□□□□□ -3.09
VPS13CQ709C8 RNU6-639P-201ENST00000384074 107 ntBASIC-4.25□□□□□ -3.09
VPS13CQ709C8 MIR519C-201ENST00000385053 87 ntBASIC-4.25□□□□□ -3.09
VPS13CQ709C8 MIR3121-201ENST00000579680 77 ntBASIC-4.25□□□□□ -3.09
VPS13CQ709C8 SNORD42A-201ENST00000459584 64 ntBASIC-4.26□□□□□ -3.09
VPS13CQ709C8 snoU2_19.4-201ENST00000364329 80 ntBASIC-4.26□□□□□ -3.09
VPS13CQ709C8 SNORD2.1-201ENST00000458762 69 ntBASIC-4.26□□□□□ -3.09
VPS13CQ709C8 MIR376A1-201ENST00000616574 68 ntBASIC-4.26□□□□□ -3.09
VPS13CQ709C8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.26□□□□□ -3.09
VPS13CQ709C8 AC074348.1-201ENST00000426503 132 ntBASIC-4.27□□□□□ -3.09
VPS13CQ709C8 MIR3613-201ENST00000579844 87 ntBASIC-4.27□□□□□ -3.09
VPS13CQ709C8 MIR548AI-201ENST00000579940 88 ntBASIC-4.27□□□□□ -3.09
VPS13CQ709C8 Y_RNA.602-201ENST00000410535 92 ntBASIC-4.27□□□□□ -3.09
VPS13CQ709C8 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.28□□□□□ -3.09
VPS13CQ709C8 DLEU2_2.2-201ENST00000615474 90 ntBASIC-4.28□□□□□ -3.09
VPS13CQ709C8 SNORA25.1-201ENST00000362326 128 ntBASIC-4.28□□□□□ -3.1
VPS13CQ709C8 RNY3P2-201ENST00000362918 102 ntBASIC-4.29□□□□□ -3.1
VPS13CQ709C8 RNU6-557P-201ENST00000516842 110 ntBASIC-4.29□□□□□ -3.1
VPS13CQ709C8 RNU6-620P-201ENST00000384017 96 ntBASIC-4.29□□□□□ -3.1
VPS13CQ709C8 MIR548AL-201ENST00000578416 97 ntBASIC-4.29□□□□□ -3.1
VPS13CQ709C8 MIR4999-201ENST00000585029 91 ntBASIC-4.29□□□□□ -3.1
VPS13CQ709C8 RNU7-169P-201ENST00000459456 61 ntBASIC-4.3□□□□□ -3.1
VPS13CQ709C8 MIR1297-201ENST00000637311 77 ntBASIC-4.3□□□□□ -3.1
VPS13CQ709C8 RNU6-566P-201ENST00000516790 107 ntBASIC-4.3□□□□□ -3.1
VPS13CQ709C8 RNU6-768P-201ENST00000384683 107 ntBASIC-4.31□□□□□ -3.1
VPS13CQ709C8 RNU6-1088P-201ENST00000516850 104 ntBASIC-4.31□□□□□ -3.1
VPS13CQ709C8 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.31□□□□□ -3.1
VPS13CQ709C8 RNU6-373P-201ENST00000411247 98 ntBASIC-4.31□□□□□ -3.1
VPS13CQ709C8 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.32□□□□□ -3.1
VPS13CQ709C8 RNU6-686P-201ENST00000364839 107 ntBASIC-4.32□□□□□ -3.1
VPS13CQ709C8 RNU6-381P-201ENST00000391259 108 ntBASIC-4.32□□□□□ -3.1
VPS13CQ709C8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.32□□□□□ -3.1
VPS13CQ709C8 MIR6844-201ENST00000637122 62 ntBASIC-4.32□□□□□ -3.1
VPS13CQ709C8 SNORD113-1-201ENST00000365321 69 ntBASIC-4.33□□□□□ -3.1
VPS13CQ709C8 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.33□□□□□ -3.1
VPS13CQ709C8 MIR4679-2-201ENST00000578358 77 ntBASIC-4.33□□□□□ -3.1
VPS13CQ709C8 MIR5009-201ENST00000578736 100 ntBASIC-4.33□□□□□ -3.1
VPS13CQ709C8 RNU6-332P-201ENST00000391193 108 ntBASIC-4.33□□□□□ -3.1
VPS13CQ709C8 RNU6-940P-201ENST00000363433 104 ntBASIC-4.34□□□□□ -3.1
VPS13CQ709C8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.34□□□□□ -3.1
VPS13CQ709C8 RNY4P19-201ENST00000362530 96 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 SEPT14P3-201ENST00000439401 183 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 AL732372.2-207ENST00000445840 183 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 SEPT14P2-201ENST00000453405 183 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 FO082796.1-201ENST00000523795 183 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 MIR514A2-201ENST00000385131 88 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 MIR514A3-201ENST00000385132 88 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-4.35□□□□□ -3.11
VPS13CQ709C8 Y_RNA.29-201ENST00000362570 113 ntBASIC-4.36□□□□□ -3.11
VPS13CQ709C8 SNORA40.3-201ENST00000390964 122 ntBASIC-4.36□□□□□ -3.11
VPS13CQ709C8 SNORD115-46-201ENST00000390982 71 ntBASIC-4.36□□□□□ -3.11
VPS13CQ709C8 MIR548X-201ENST00000580069 75 ntBASIC-4.36□□□□□ -3.11
VPS13CQ709C8 Y_RNA.414-201ENST00000384011 101 ntBASIC-4.37□□□□□ -3.11
VPS13CQ709C8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.37□□□□□ -3.11
VPS13CQ709C8 RNU6-1046P-201ENST00000516538 107 ntBASIC-4.37□□□□□ -3.11
VPS13CQ709C8 RNU6-1192P-201ENST00000612197 107 ntBASIC-4.37□□□□□ -3.11
VPS13CQ709C8 RNU6-489P-201ENST00000618289 107 ntBASIC-4.37□□□□□ -3.11
VPS13CQ709C8 Y_RNA.594-201ENST00000410373 140 ntBASIC-4.38□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms