Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.47□□□□□ -2.64
TRIM40Q6P9F5 AL450471.1-201ENST00000447509 127 ntBASIC-1.47□□□□□ -2.64
TRIM40Q6P9F5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.47□□□□□ -2.64
TRIM40Q6P9F5 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.48□□□□□ -2.65
TRIM40Q6P9F5 MIR601-201ENST00000385256 79 ntBASIC-1.48□□□□□ -2.65
TRIM40Q6P9F5 RNA5SP461-201ENST00000516451 104 ntBASIC-1.48□□□□□ -2.65
TRIM40Q6P9F5 AC090425.1-201ENST00000610007 140 ntBASIC-1.48□□□□□ -2.65
TRIM40Q6P9F5 SNORA26.4-201ENST00000391188 123 ntBASIC-1.49□□□□□ -2.65
TRIM40Q6P9F5 SNORD115-33-201ENST00000363723 82 ntBASIC-1.5□□□□□ -2.65
TRIM40Q6P9F5 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.5□□□□□ -2.65
TRIM40Q6P9F5 RNU6-479P-201ENST00000516348 105 ntBASIC-1.5□□□□□ -2.65
TRIM40Q6P9F5 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.51□□□□□ -2.65
TRIM40Q6P9F5 MIR519A2-201ENST00000384990 87 ntBASIC-1.51□□□□□ -2.65
TRIM40Q6P9F5 RNA5SP180-201ENST00000516181 101 ntBASIC-1.51□□□□□ -2.65
TRIM40Q6P9F5 RNU7-153P-201ENST00000516455 62 ntBASIC-1.51□□□□□ -2.65
TRIM40Q6P9F5 RNU6-794P-201ENST00000517261 64 ntBASIC-1.51□□□□□ -2.65
TRIM40Q6P9F5 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 RNU6-681P-201ENST00000364012 104 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 RNU6-518P-201ENST00000516056 96 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 RNU6-162P-201ENST00000516228 103 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 MIR5591-201ENST00000578248 65 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 U7.3-201ENST00000616123 62 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.52□□□□□ -2.65
TRIM40Q6P9F5 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.53□□□□□ -2.65
TRIM40Q6P9F5 RNU6-340P-201ENST00000364005 107 ntBASIC-1.53□□□□□ -2.65
TRIM40Q6P9F5 RNU6-746P-201ENST00000384112 109 ntBASIC-1.53□□□□□ -2.65
TRIM40Q6P9F5 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.53□□□□□ -2.65
TRIM40Q6P9F5 SNORD63.1-201ENST00000516178 80 ntBASIC-1.53□□□□□ -2.65
TRIM40Q6P9F5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.54□□□□□ -2.66
TRIM40Q6P9F5 AL021921.1-201ENST00000442774 93 ntBASIC-1.54□□□□□ -2.66
TRIM40Q6P9F5 MIR4770-201ENST00000579149 58 ntBASIC-1.54□□□□□ -2.66
TRIM40Q6P9F5 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.55□□□□□ -2.66
TRIM40Q6P9F5 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.55□□□□□ -2.66
TRIM40Q6P9F5 RNU6-554P-201ENST00000410466 106 ntBASIC-1.55□□□□□ -2.66
TRIM40Q6P9F5 MIR29B1-201ENST00000385015 81 ntBASIC-1.56□□□□□ -2.66
TRIM40Q6P9F5 SNORD77.2-201ENST00000391045 68 ntBASIC-1.56□□□□□ -2.66
TRIM40Q6P9F5 RNU6-109P-201ENST00000516364 107 ntBASIC-1.56□□□□□ -2.66
TRIM40Q6P9F5 RNU6-184P-201ENST00000516514 107 ntBASIC-1.56□□□□□ -2.66
TRIM40Q6P9F5 RNU6-106P-201ENST00000384405 107 ntBASIC-1.57□□□□□ -2.66
TRIM40Q6P9F5 MIR519C-201ENST00000385053 87 ntBASIC-1.57□□□□□ -2.66
TRIM40Q6P9F5 snosnR66.1-201ENST00000391095 99 ntBASIC-1.57□□□□□ -2.66
TRIM40Q6P9F5 MIR8485-201ENST00000401372 91 ntBASIC-1.57□□□□□ -2.66
TRIM40Q6P9F5 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.57□□□□□ -2.66
TRIM40Q6P9F5 MIR365A-201ENST00000362260 87 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 RNU6-704P-201ENST00000364162 103 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 SNORD115-27-201ENST00000364430 82 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 MIR1468-201ENST00000410600 86 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 AL035461.1-201ENST00000421490 332 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 RNU7-134P-201ENST00000458997 64 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.58□□□□□ -2.66
TRIM40Q6P9F5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.59□□□□□ -2.66
TRIM40Q6P9F5 MIR4441-201ENST00000582623 100 ntBASIC-1.59□□□□□ -2.66
TRIM40Q6P9F5 MIR6129-201ENST00000616087 109 ntBASIC-1.59□□□□□ -2.66
TRIM40Q6P9F5 AL353691.2-201ENST00000443795 59 ntBASIC-1.6□□□□□ -2.67
TRIM40Q6P9F5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.6□□□□□ -2.67
TRIM40Q6P9F5 SNORD115-22-201ENST00000364456 82 ntBASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 MIR3133-201ENST00000583157 78 ntBASIC-1.61□□□□□ -2.67
TRIM40Q6P9F5 SNORA19-201ENST00000384737 128 ntBASIC-1.62□□□□□ -2.67
TRIM40Q6P9F5 MTATP8P2-201ENST00000435212 202 ntBASIC-1.62□□□□□ -2.67
TRIM40Q6P9F5 AC008267.6-201ENST00000441664 139 ntBASIC-1.62□□□□□ -2.67
TRIM40Q6P9F5 RNU6-656P-201ENST00000516785 107 ntBASIC-1.62□□□□□ -2.67
TRIM40Q6P9F5 MIR6818-201ENST00000621576 65 ntBASIC-1.62□□□□□ -2.67
TRIM40Q6P9F5 RNU6-959P-201ENST00000384671 107 ntBASIC-1.63□□□□□ -2.67
TRIM40Q6P9F5 MIR527-201ENST00000385244 85 ntBASIC-1.63□□□□□ -2.67
TRIM40Q6P9F5 RNU4-61P-201ENST00000411243 107 ntBASIC-1.63□□□□□ -2.67
TRIM40Q6P9F5 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.63□□□□□ -2.67
TRIM40Q6P9F5 MIR1246-201ENST00000636535 73 ntBASIC-1.63□□□□□ -2.67
TRIM40Q6P9F5 RNU6-766P-201ENST00000362478 107 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 SNORD115-37-201ENST00000363768 82 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 RNU6-732P-201ENST00000516033 103 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 RNU6-158P-201ENST00000517104 100 ntBASIC-1.64□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 RNU6-209P-201ENST00000384118 107 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 RNU6-576P-201ENST00000390854 102 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 MIR889-201ENST00000401280 79 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 RNU6-807P-201ENST00000516805 107 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 MIR4520-1-201ENST00000582609 70 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 U2.7-201ENST00000619197 100 ntBASIC-1.65□□□□□ -2.67
TRIM40Q6P9F5 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.66□□□□□ -2.68
TRIM40Q6P9F5 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.66□□□□□ -2.68
TRIM40Q6P9F5 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.66□□□□□ -2.68
TRIM40Q6P9F5 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.66□□□□□ -2.68
TRIM40Q6P9F5 RNU6-633P-201ENST00000362612 103 ntBASIC-1.67□□□□□ -2.68
TRIM40Q6P9F5 MIR6502-201ENST00000617296 76 ntBASIC-1.67□□□□□ -2.68
TRIM40Q6P9F5 RNU6-774P-201ENST00000363238 107 ntBASIC-1.68□□□□□ -2.68
TRIM40Q6P9F5 U7.5-201ENST00000517224 61 ntBASIC-1.68□□□□□ -2.68
TRIM40Q6P9F5 MIR548AG1-201ENST00000579932 66 ntBASIC-1.68□□□□□ -2.68
TRIM40Q6P9F5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.68□□□□□ -2.68
TRIM40Q6P9F5 RNU6-645P-201ENST00000364649 106 ntBASIC-1.69□□□□□ -2.68
TRIM40Q6P9F5 RNU6-246P-201ENST00000384702 107 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms