Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 RNU6-295P-201ENST00000516901 104 ntBASIC3.27□□□□□ -1.89
CHIC1Q5VXU3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHIC1Q5VXU3 AC003989.2-201ENST00000440224 169 ntBASIC3.26□□□□□ -1.89
CHIC1Q5VXU3 uc_338.36-201ENST00000622331 158 ntBASIC3.26□□□□□ -1.89
CHIC1Q5VXU3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHIC1Q5VXU3 RNU1-17P-201ENST00000363022 152 ntBASIC3.24□□□□□ -1.89
CHIC1Q5VXU3 SNORD115.2-201ENST00000391126 59 ntBASIC3.23□□□□□ -1.89
CHIC1Q5VXU3 MIR501-201ENST00000390204 84 ntBASIC3.21□□□□□ -1.9
CHIC1Q5VXU3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.21□□□□□ -1.9
CHIC1Q5VXU3 Y_RNA.519-201ENST00000384553 102 ntBASIC3.2□□□□□ -1.9
CHIC1Q5VXU3 MIR9-3-201ENST00000385084 90 ntBASIC3.2□□□□□ -1.9
CHIC1Q5VXU3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.2□□□□□ -1.9
CHIC1Q5VXU3 RNU6-1133P-201ENST00000410963 100 ntBASIC3.2□□□□□ -1.9
CHIC1Q5VXU3 AL391099.1-201ENST00000624635 187 ntBASIC3.2□□□□□ -1.9
CHIC1Q5VXU3 Y_RNA.134-201ENST00000363435 105 ntBASIC3.19□□□□□ -1.9
CHIC1Q5VXU3 Y_RNA.423-201ENST00000384057 113 ntBASIC3.19□□□□□ -1.9
CHIC1Q5VXU3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC3.19□□□□□ -1.9
CHIC1Q5VXU3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CHIC1Q5VXU3 RNA5SP517-201ENST00000364724 117 ntBASIC3.18□□□□□ -1.9
CHIC1Q5VXU3 SNORD19-201ENST00000391191 68 ntBASIC3.18□□□□□ -1.9
CHIC1Q5VXU3 MIR144-201ENST00000384886 86 ntBASIC3.17□□□□□ -1.9
CHIC1Q5VXU3 MIR6845-201ENST00000613182 61 ntBASIC3.16□□□□□ -1.9
CHIC1Q5VXU3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHIC1Q5VXU3 SNORA25.18-201ENST00000607153 114 ntBASIC3.15□□□□□ -1.91
CHIC1Q5VXU3 Z82195.2-201ENST00000612348 18351 ntBASIC3.13□□□□□ -1.91
CHIC1Q5VXU3 Y_RNA.382-201ENST00000365672 114 ntBASIC3.13□□□□□ -1.91
CHIC1Q5VXU3 MIR583-201ENST00000384846 75 ntBASIC3.11□□□□□ -1.91
CHIC1Q5VXU3 RNU6-1053P-201ENST00000515930 101 ntBASIC3.11□□□□□ -1.91
CHIC1Q5VXU3 Y_RNA.118-201ENST00000363300 101 ntBASIC3.1□□□□□ -1.91
CHIC1Q5VXU3 Y_RNA.226-201ENST00000364337 114 ntBASIC3.1□□□□□ -1.91
CHIC1Q5VXU3 SNORD48-201ENST00000364953 64 ntBASIC3.1□□□□□ -1.91
CHIC1Q5VXU3 AC108667.1-201ENST00000428618 249 ntBASIC3.1□□□□□ -1.91
CHIC1Q5VXU3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CHIC1Q5VXU3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC3.09□□□□□ -1.91
CHIC1Q5VXU3 SNORA36.2-201ENST00000384004 127 ntBASIC3.09□□□□□ -1.91
CHIC1Q5VXU3 RNA5SP67-201ENST00000516422 131 ntBASIC3.08□□□□□ -1.92
CHIC1Q5VXU3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHIC1Q5VXU3 SNORA16.1-201ENST00000364597 132 ntBASIC3.07□□□□□ -1.92
CHIC1Q5VXU3 MIR106A-201ENST00000384870 81 ntBASIC3.07□□□□□ -1.92
CHIC1Q5VXU3 RNA5SP182-201ENST00000516064 82 ntBASIC3.07□□□□□ -1.92
CHIC1Q5VXU3 MIR876-201ENST00000401147 81 ntBASIC3.04□□□□□ -1.92
CHIC1Q5VXU3 MIR1287-201ENST00000408492 90 ntBASIC3.04□□□□□ -1.92
CHIC1Q5VXU3 MIR4448-201ENST00000584360 86 ntBASIC3.04□□□□□ -1.92
CHIC1Q5VXU3 MIR4419B-201ENST00000577260 68 ntBASIC3.03□□□□□ -1.92
CHIC1Q5VXU3 SNORD118-201ENST00000363593 134 ntBASIC3.02□□□□□ -1.93
CHIC1Q5VXU3 ACA64.5-201ENST00000516207 127 ntBASIC3.02□□□□□ -1.93
CHIC1Q5VXU3 RNA5SP404-201ENST00000517118 132 ntBASIC3.02□□□□□ -1.93
CHIC1Q5VXU3 MIR4498-201ENST00000577599 66 ntBASIC3.02□□□□□ -1.93
CHIC1Q5VXU3 MIR3925-201ENST00000584674 77 ntBASIC3.02□□□□□ -1.93
CHIC1Q5VXU3 RNU6-973P-201ENST00000364690 107 ntBASIC3.01□□□□□ -1.93
CHIC1Q5VXU3 SNORD60-201ENST00000383903 83 ntBASIC3.01□□□□□ -1.93
CHIC1Q5VXU3 RNU6-848P-201ENST00000515948 107 ntBASIC3□□□□□ -1.93
CHIC1Q5VXU3 RNU6-617P-201ENST00000516147 107 ntBASIC3□□□□□ -1.93
CHIC1Q5VXU3 RNU6-473P-201ENST00000516164 107 ntBASIC3□□□□□ -1.93
CHIC1Q5VXU3 RNU6-1049P-201ENST00000516414 107 ntBASIC3□□□□□ -1.93
CHIC1Q5VXU3 SNORA40.8-201ENST00000411034 126 ntBASIC2.99□□□□□ -1.93
CHIC1Q5VXU3 MIR4303-201ENST00000581299 66 ntBASIC2.99□□□□□ -1.93
CHIC1Q5VXU3 MIR8081-201ENST00000611533 95 ntBASIC2.99□□□□□ -1.93
CHIC1Q5VXU3 MIR140-201ENST00000385282 100 ntBASIC2.98□□□□□ -1.93
CHIC1Q5VXU3 RNU6-1233P-201ENST00000362922 102 ntBASIC2.97□□□□□ -1.93
CHIC1Q5VXU3 MIR518A1-201ENST00000385068 85 ntBASIC2.97□□□□□ -1.93
CHIC1Q5VXU3 SNORD71-201ENST00000411292 86 ntBASIC2.97□□□□□ -1.93
CHIC1Q5VXU3 RNU7-55P-201ENST00000459426 62 ntBASIC2.96□□□□□ -1.94
CHIC1Q5VXU3 RNU4-54P-201ENST00000516428 129 ntBASIC2.96□□□□□ -1.94
CHIC1Q5VXU3 AL353765.1-201ENST00000605514 183 ntBASIC2.96□□□□□ -1.94
CHIC1Q5VXU3 RNA5SP98-201ENST00000363158 137 ntBASIC2.95□□□□□ -1.94
CHIC1Q5VXU3 SNORD13-201ENST00000459299 104 ntBASIC2.95□□□□□ -1.94
CHIC1Q5VXU3 MIR378A-201ENST00000362177 66 ntBASIC2.94□□□□□ -1.94
CHIC1Q5VXU3 MIR643-201ENST00000385267 97 ntBASIC2.94□□□□□ -1.94
CHIC1Q5VXU3 MIR4255-201ENST00000579351 72 ntBASIC2.94□□□□□ -1.94
CHIC1Q5VXU3 SNORD26-201ENST00000384147 75 ntBASIC2.93□□□□□ -1.94
CHIC1Q5VXU3 MIR760-201ENST00000390220 80 ntBASIC2.93□□□□□ -1.94
CHIC1Q5VXU3 RNA5SP364-201ENST00000516938 78 ntBASIC2.93□□□□□ -1.94
CHIC1Q5VXU3 MIR124-2-201ENST00000385081 109 ntBASIC2.92□□□□□ -1.94
CHIC1Q5VXU3 AC096531.1-201ENST00000419107 107 ntBASIC2.91□□□□□ -1.94
CHIC1Q5VXU3 MIR6755-201ENST00000619993 66 ntBASIC2.91□□□□□ -1.94
CHIC1Q5VXU3 uc_338.20-201ENST00000621563 178 ntBASIC2.91□□□□□ -1.94
CHIC1Q5VXU3 RNA5SP190-201ENST00000365222 118 ntBASIC2.9□□□□□ -1.95
CHIC1Q5VXU3 RNU6-608P-201ENST00000383927 104 ntBASIC2.9□□□□□ -1.95
CHIC1Q5VXU3 SNORA42.1-201ENST00000363515 137 ntBASIC2.88□□□□□ -1.95
CHIC1Q5VXU3 SNORA25.15-201ENST00000516487 89 ntBASIC2.88□□□□□ -1.95
CHIC1Q5VXU3 MIR5704-201ENST00000584029 77 ntBASIC2.88□□□□□ -1.95
CHIC1Q5VXU3 snoU13.31-201ENST00000607291 104 ntBASIC2.88□□□□□ -1.95
CHIC1Q5VXU3 AP002795.1-201ENST00000534879 84 ntBASIC2.87□□□□□ -1.95
CHIC1Q5VXU3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CHIC1Q5VXU3 MIR8068-201ENST00000618032 68 ntBASIC2.86□□□□□ -1.95
CHIC1Q5VXU3 SCARNA11.2-201ENST00000517183 154 ntBASIC2.85□□□□□ -1.95
CHIC1Q5VXU3 MIR548N-201ENST00000408742 75 ntBASIC2.84□□□□□ -1.95
CHIC1Q5VXU3 MIR499B-201ENST00000636498 73 ntBASIC2.82□□□□□ -1.96
CHIC1Q5VXU3 RNU6-321P-201ENST00000410912 106 ntBASIC2.81□□□□□ -1.96
CHIC1Q5VXU3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.8□□□□□ -1.96
CHIC1Q5VXU3 TRMT112P2-201ENST00000512910 132 ntBASIC2.79□□□□□ -1.96
CHIC1Q5VXU3 MIR8070-201ENST00000616510 88 ntBASIC2.79□□□□□ -1.96
CHIC1Q5VXU3 RNA5SP128-201ENST00000365305 116 ntBASIC2.78□□□□□ -1.96
CHIC1Q5VXU3 RNU6-836P-201ENST00000362920 107 ntBASIC2.77□□□□□ -1.97
CHIC1Q5VXU3 Y_RNA.320-201ENST00000365144 102 ntBASIC2.77□□□□□ -1.97
CHIC1Q5VXU3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHIC1Q5VXU3 MIR26B-201ENST00000362251 77 ntBASIC2.75□□□□□ -1.97
CHIC1Q5VXU3 RNU6-900P-201ENST00000384498 102 ntBASIC2.75□□□□□ -1.97
CHIC1Q5VXU3 RPS29P23-201ENST00000458635 123 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms