Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR548D2-201ENST00000384955 97 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 SNORA17.4-201ENST00000391287 132 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR1302-6-201ENST00000408466 90 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 AC109635.3-201ENST00000529536 185 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR4796-201ENST00000580742 81 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Z99129.1-201ENST00000612510 255 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 SNORD77.2-201ENST00000391045 68 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 MIR3658-201ENST00000636291 56 ntBASIC-1.21□□□□□ -2.6
HSPG2P98160 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 SNORA41B-201ENST00000384785 128 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-493P-201ENST00000391321 108 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR8053-201ENST00000613344 75 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR579-201ENST00000385221 98 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-11-201ENST00000408051 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR548P-201ENST00000408336 84 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-9-201ENST00000408365 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-10-201ENST00000408734 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 MIR1302-2-201ENST00000607096 138 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-624P-201ENST00000363411 107 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-956P-201ENST00000458868 103 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 RNU6-303P-201ENST00000517091 106 ntBASIC-1.22□□□□□ -2.6
HSPG2P98160 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-974P-201ENST00000384099 108 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-649P-201ENST00000384463 107 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-554P-201ENST00000410466 106 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU7-152P-201ENST00000458982 64 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 SNORD63.2-201ENST00000516303 64 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-182P-201ENST00000516970 105 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 RNU6-176P-201ENST00000517196 105 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 U2.14-201ENST00000615943 113 ntBASIC-1.22□□□□□ -2.61
HSPG2P98160 SNORD45.2-201ENST00000363552 72 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 RNU6-828P-201ENST00000364876 107 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 RNU6-121P-201ENST00000410525 99 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR3675-201ENST00000583661 73 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR4777-201ENST00000583710 86 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
HSPG2P98160 SNORA40.4-201ENST00000390971 128 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 SNORD37.2-201ENST00000391075 66 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.23□□□□□ -2.61
HSPG2P98160 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR3613-201ENST00000579844 87 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 AC103810.7-201ENST00000607821 91 ntBASIC-1.23□□□□□ -2.61
HSPG2P98160 MIR369-201ENST00000362155 70 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P2-201ENST00000362918 102 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P8-201ENST00000411366 126 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY4P14-201ENST00000363656 96 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-537P-201ENST00000517277 103 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 AC090971.5-201ENST00000621102 293 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-755P-201ENST00000364400 103 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 MTND2P23-201ENST00000422990 651 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 SCARNA23-201ENST00000516060 130 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNA5SP173-201ENST00000364857 136 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-590P-201ENST00000365039 107 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNU6-639P-201ENST00000384074 107 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 RNY3P15-201ENST00000516297 97 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.24□□□□□ -2.61
HSPG2P98160 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR7110-201ENST00000612638 86 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR7978-201ENST00000636158 59 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR202-201ENST00000362219 110 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 MIR1263-201ENST00000408324 86 ntBASIC-1.25□□□□□ -2.61
HSPG2P98160 RNU6-822P-201ENST00000362707 106 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-823P-201ENST00000391042 103 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU4-14P-201ENST00000410858 122 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 MTND4P17-201ENST00000470444 350 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-686P-201ENST00000364839 107 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-300P-201ENST00000459080 104 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU7-153P-201ENST00000516455 62 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-557P-201ENST00000516842 110 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 MIR4282-201ENST00000583613 67 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 AC078883.4-201ENST00000623218 367 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 RNU6-770P-201ENST00000363929 105 ntBASIC-1.26□□□□□ -2.61
HSPG2P98160 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 RNU6-68P-201ENST00000516576 104 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 MIR620-201ENST00000385232 95 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.27□□□□□ -2.61
HSPG2P98160 U4.5-201ENST00000617137 123 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 564.4 ms