Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.9□□□□□ -2.55
LIMK1P53667 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.91□□□□□ -2.56
LIMK1P53667 MIR2052-201ENST00000636055 55 ntBASIC-0.91□□□□□ -2.56
LIMK1P53667 SNORD115-23-201ENST00000364461 82 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 SNORD114-3-201ENST00000364969 75 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 MIR147A-201ENST00000385079 72 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 SCARNA18B-201ENST00000458806 135 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 MIR3910-1-201ENST00000580936 111 ntBASIC-0.92□□□□□ -2.56
LIMK1P53667 RNU6-431P-201ENST00000383874 107 ntBASIC-0.93□□□□□ -2.56
LIMK1P53667 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.93□□□□□ -2.56
LIMK1P53667 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.93□□□□□ -2.56
LIMK1P53667 RNU7-153P-201ENST00000516455 62 ntBASIC-0.93□□□□□ -2.56
LIMK1P53667 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.94□□□□□ -2.56
LIMK1P53667 RNU6-905P-201ENST00000384434 107 ntBASIC-0.94□□□□□ -2.56
LIMK1P53667 MTATP8P2-201ENST00000435212 202 ntBASIC-0.94□□□□□ -2.56
LIMK1P53667 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
LIMK1P53667 RNU6-24P-201ENST00000384440 107 ntBASIC-0.95□□□□□ -2.56
LIMK1P53667 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.95□□□□□ -2.56
LIMK1P53667 MIR519C-201ENST00000385053 87 ntBASIC-0.95□□□□□ -2.56
LIMK1P53667 AC022137.1-201ENST00000483735 151 ntBASIC-0.95□□□□□ -2.56
LIMK1P53667 MIR450A1-201ENST00000362262 91 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 RNU2-51P-201ENST00000410708 197 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 AP000533.3-201ENST00000447704 118 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 AC090617.8-201ENST00000623339 167 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 MIR382-201ENST00000637119 76 ntBASIC-0.96□□□□□ -2.56
LIMK1P53667 SNORD115-37-201ENST00000363768 82 ntBASIC-0.97□□□□□ -2.56
LIMK1P53667 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
LIMK1P53667 YWHAEP3-201ENST00000582767 121 ntBASIC-0.97□□□□□ -2.56
LIMK1P53667 MIR3657-201ENST00000584818 117 ntBASIC-0.97□□□□□ -2.56
LIMK1P53667 SNORA2.1-201ENST00000363089 137 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 SNORD64-201ENST00000386683 67 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 MIR3165-201ENST00000579874 75 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 MIR4306-201ENST00000583390 91 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 U6.81-201ENST00000612550 106 ntBASIC-0.98□□□□□ -2.57
LIMK1P53667 RNU6-208P-201ENST00000362431 107 ntBASIC-0.99□□□□□ -2.57
LIMK1P53667 RNA5SP192-201ENST00000364404 120 ntBASIC-0.99□□□□□ -2.57
LIMK1P53667 SNORA62.4-201ENST00000365504 151 ntBASIC-0.99□□□□□ -2.57
LIMK1P53667 AC140658.3-201ENST00000567603 271 ntBASIC-0.99□□□□□ -2.57
LIMK1P53667 RNU6-681P-201ENST00000364012 104 ntBASIC-1□□□□□ -2.57
LIMK1P53667 SNORD18.2-201ENST00000459604 70 ntBASIC-1□□□□□ -2.57
LIMK1P53667 RNU6-158P-201ENST00000517104 100 ntBASIC-1□□□□□ -2.57
LIMK1P53667 MIR3115-201ENST00000577915 68 ntBASIC-1□□□□□ -2.57
LIMK1P53667 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.01□□□□□ -2.57
LIMK1P53667 SNORA33.1-201ENST00000364957 130 ntBASIC-1.01□□□□□ -2.57
LIMK1P53667 AL606753.1-201ENST00000427435 87 ntBASIC-1.01□□□□□ -2.57
LIMK1P53667 SNORD115-27-201ENST00000364430 82 ntBASIC-1.02□□□□□ -2.57
LIMK1P53667 SNORA40.13-201ENST00000516379 120 ntBASIC-1.02□□□□□ -2.57
LIMK1P53667 MIR124-2-201ENST00000385081 109 ntBASIC-1.03□□□□□ -2.57
LIMK1P53667 SNORD77.2-201ENST00000391045 68 ntBASIC-1.03□□□□□ -2.57
LIMK1P53667 RNY4P18-201ENST00000391107 89 ntBASIC-1.04□□□□□ -2.58
LIMK1P53667 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.04□□□□□ -2.58
LIMK1P53667 CYP3A54P-201ENST00000566950 75 ntBASIC-1.04□□□□□ -2.58
LIMK1P53667 MIR4668-201ENST00000582284 70 ntBASIC-1.04□□□□□ -2.58
LIMK1P53667 MIR365A-201ENST00000362260 87 ntBASIC-1.05□□□□□ -2.58
LIMK1P53667 MIR1255B2-201ENST00000408618 67 ntBASIC-1.05□□□□□ -2.58
LIMK1P53667 RNU6-752P-201ENST00000516376 102 ntBASIC-1.05□□□□□ -2.58
LIMK1P53667 AL353803.5-201ENST00000599815 141 ntBASIC-1.05□□□□□ -2.58
LIMK1P53667 RNU6-340P-201ENST00000364005 107 ntBASIC-1.06□□□□□ -2.58
LIMK1P53667 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.06□□□□□ -2.58
LIMK1P53667 SNORD116-22-201ENST00000384430 92 ntBASIC-1.06□□□□□ -2.58
LIMK1P53667 MIR4464-201ENST00000580818 92 ntBASIC-1.06□□□□□ -2.58
LIMK1P53667 RNU6-633P-201ENST00000362612 103 ntBASIC-1.07□□□□□ -2.58
LIMK1P53667 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.07□□□□□ -2.58
LIMK1P53667 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
LIMK1P53667 AP001318.4-201ENST00000616637 121 ntBASIC-1.07□□□□□ -2.58
LIMK1P53667 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.08□□□□□ -2.58
LIMK1P53667 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.08□□□□□ -2.58
LIMK1P53667 MIR521-2-201ENST00000384818 87 ntBASIC-1.09□□□□□ -2.58
LIMK1P53667 AL603908.1-201ENST00000406098 201 ntBASIC-1.09□□□□□ -2.58
LIMK1P53667 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.09□□□□□ -2.58
LIMK1P53667 AC093729.1-201ENST00000513074 128 ntBASIC-1.09□□□□□ -2.58
LIMK1P53667 RNU6-706P-201ENST00000517229 104 ntBASIC-1.09□□□□□ -2.58
LIMK1P53667 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.09□□□□□ -2.58
LIMK1P53667 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.1□□□□□ -2.59
LIMK1P53667 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.1□□□□□ -2.59
LIMK1P53667 MIR29B1-201ENST00000385015 81 ntBASIC-1.1□□□□□ -2.59
LIMK1P53667 MIR6888-201ENST00000621977 67 ntBASIC-1.1□□□□□ -2.59
LIMK1P53667 AC138207.3-201ENST00000585289 166 ntBASIC-1.11□□□□□ -2.59
LIMK1P53667 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
LIMK1P53667 AL445584.3-201ENST00000617173 78 ntBASIC-1.11□□□□□ -2.59
LIMK1P53667 MALAT1.1-201ENST00000618249 95 ntBASIC-1.11□□□□□ -2.59
LIMK1P53667 SNORD114-17-201ENST00000364699 75 ntBASIC-1.12□□□□□ -2.59
LIMK1P53667 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.12□□□□□ -2.59
LIMK1P53667 RNA5SP461-201ENST00000516451 104 ntBASIC-1.13□□□□□ -2.59
LIMK1P53667 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.14□□□□□ -2.59
LIMK1P53667 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.14□□□□□ -2.59
LIMK1P53667 RNU6-789P-201ENST00000517105 102 ntBASIC-1.14□□□□□ -2.59
LIMK1P53667 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 SNORD113-1-201ENST00000365321 69 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 RNU6-32P-201ENST00000383948 107 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 RNU6-13P-201ENST00000384248 107 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 RNU6-12P-201ENST00000384604 107 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 RNU6-41P-201ENST00000384741 107 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 MIR1285-2-201ENST00000408311 88 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 AL035461.1-201ENST00000421490 332 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 350.3 ms