Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC090617.8-201ENST00000623339 167 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 SNORA2.1-201ENST00000363089 137 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 SNORA3B-201ENST00000391305 131 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 RNA5SP89-201ENST00000410300 108 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 RNU6-592P-201ENST00000411333 103 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 AL627230.5-201ENST00000619807 58 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.55□□□□□ -2.5
PDX1P52945 MIR548BB-201ENST00000626714 66 ntBASIC-0.56□□□□□ -2.5
PDX1P52945 RNU6-340P-201ENST00000364005 107 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 SNORD115-23-201ENST00000364461 82 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 AC093729.1-201ENST00000513074 128 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 RNU6-844P-201ENST00000517175 102 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 AC140658.3-201ENST00000567603 271 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 U6.96-201ENST00000636425 70 ntBASIC-0.57□□□□□ -2.5
PDX1P52945 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.58□□□□□ -2.5
PDX1P52945 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.58□□□□□ -2.5
PDX1P52945 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
PDX1P52945 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
PDX1P52945 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 RNU6-624P-201ENST00000363411 107 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 RNU6-153P-201ENST00000364422 104 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 SNORA33.1-201ENST00000364957 130 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 RNU6-675P-201ENST00000384236 104 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 RNU6-49P-201ENST00000384256 107 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 MIR224-201ENST00000384889 81 ntBASIC-0.59□□□□□ -2.5
PDX1P52945 MIR518B-201ENST00000385127 83 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 SNORD22.1-201ENST00000516331 125 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 RNU6-752P-201ENST00000516376 102 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 MIR548AX-201ENST00000580117 73 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 MIR6854-201ENST00000614935 69 ntBASIC-0.6□□□□□ -2.51
PDX1P52945 MIR204-201ENST00000385200 110 ntBASIC-0.61□□□□□ -2.51
PDX1P52945 RNU6-881P-201ENST00000516813 102 ntBASIC-0.61□□□□□ -2.51
PDX1P52945 snoR1.1-201ENST00000628177 80 ntBASIC-0.61□□□□□ -2.51
PDX1P52945 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 RNU6-30P-201ENST00000384561 107 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 SNORA13-201ENST00000458790 133 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 MIR4464-201ENST00000580818 92 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
PDX1P52945 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 SNORD74.6-201ENST00000364796 70 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 MT-TQ-201ENST00000387372 72 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 RNU4-63P-201ENST00000411313 118 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 YWHAEP3-201ENST00000582767 121 ntBASIC-0.63□□□□□ -2.51
PDX1P52945 RNU6-681P-201ENST00000364012 104 ntBASIC-0.64□□□□□ -2.51
PDX1P52945 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.64□□□□□ -2.51
PDX1P52945 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.64□□□□□ -2.51
PDX1P52945 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.64□□□□□ -2.51
PDX1P52945 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
PDX1P52945 MIR409-201ENST00000362237 79 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 RNU6-431P-201ENST00000383874 107 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 AL500527.2-201ENST00000454105 95 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.65□□□□□ -2.51
PDX1P52945 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.66□□□□□ -2.52
PDX1P52945 RNU6-478P-201ENST00000363904 110 ntBASIC-0.66□□□□□ -2.52
PDX1P52945 AC006160.2-201ENST00000637708 154 ntBASIC-0.66□□□□□ -2.52
PDX1P52945 RNA5SP331-201ENST00000364986 107 ntBASIC-0.67□□□□□ -2.52
PDX1P52945 MIR517B-201ENST00000385102 67 ntBASIC-0.67□□□□□ -2.52
PDX1P52945 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
PDX1P52945 RNU6-557P-201ENST00000516842 110 ntBASIC-0.67□□□□□ -2.52
PDX1P52945 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 MIR521-2-201ENST00000384818 87 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 MIR147A-201ENST00000385079 72 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 AC022137.1-201ENST00000483735 151 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 MIR6888-201ENST00000621977 67 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 MIR6739-201ENST00000622461 75 ntBASIC-0.68□□□□□ -2.52
PDX1P52945 SNORD114-25-201ENST00000363742 72 ntBASIC-0.69□□□□□ -2.52
PDX1P52945 SNORD64-201ENST00000386683 67 ntBASIC-0.69□□□□□ -2.52
PDX1P52945 MIR1255B2-201ENST00000408618 67 ntBASIC-0.69□□□□□ -2.52
PDX1P52945 RNY4P30-201ENST00000410216 95 ntBASIC-0.69□□□□□ -2.52
PDX1P52945 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.69□□□□□ -2.52
PDX1P52945 RNU6-330P-201ENST00000363015 107 ntBASIC-0.7□□□□□ -2.52
PDX1P52945 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.7□□□□□ -2.52
PDX1P52945 MIR196A1-201ENST00000388006 70 ntBASIC-0.7□□□□□ -2.52
PDX1P52945 AL353803.5-201ENST00000599815 141 ntBASIC-0.7□□□□□ -2.52
PDX1P52945 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 RNU6-686P-201ENST00000364839 107 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 RNU6-129P-201ENST00000391022 107 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 RNU6-303P-201ENST00000517091 106 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 CYP3A54P-201ENST00000566950 75 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 AL445584.3-201ENST00000617173 78 ntBASIC-0.71□□□□□ -2.52
PDX1P52945 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.72□□□□□ -2.52
PDX1P52945 SNORA8.1-201ENST00000384250 140 ntBASIC-0.72□□□□□ -2.52
PDX1P52945 MIR124-2-201ENST00000385081 109 ntBASIC-0.72□□□□□ -2.52
PDX1P52945 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.72□□□□□ -2.52
PDX1P52945 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.73□□□□□ -2.53
PDX1P52945 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
PDX1P52945 MIR382-201ENST00000637119 76 ntBASIC-0.73□□□□□ -2.53
PDX1P52945 RNY1P1-201ENST00000364372 112 ntBASIC-0.74□□□□□ -2.53
PDX1P52945 SNORA62.4-201ENST00000365504 151 ntBASIC-0.74□□□□□ -2.53
PDX1P52945 MIR5588-201ENST00000581890 63 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms