Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.3□□□□□ -2.62
MSH6P52701 SNORD116-14-201ENST00000383894 92 ntBASIC-1.31□□□□□ -2.62
MSH6P52701 SNORD116-17-201ENST00000383929 92 ntBASIC-1.31□□□□□ -2.62
MSH6P52701 SNORD116-15-201ENST00000384445 92 ntBASIC-1.31□□□□□ -2.62
MSH6P52701 SNORD116-19-201ENST00000384729 92 ntBASIC-1.31□□□□□ -2.62
MSH6P52701 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.31□□□□□ -2.62
MSH6P52701 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
MSH6P52701 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.33□□□□□ -2.62
MSH6P52701 RNU6-706P-201ENST00000517229 104 ntBASIC-1.33□□□□□ -2.62
MSH6P52701 AC090425.1-201ENST00000610007 140 ntBASIC-1.33□□□□□ -2.62
MSH6P52701 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.33□□□□□ -2.62
MSH6P52701 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.33□□□□□ -2.62
MSH6P52701 MIR590-201ENST00000385008 97 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 RNU7-61P-201ENST00000515897 61 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 MIR6739-201ENST00000622461 75 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 MIR1302-5-201ENST00000408164 150 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.34□□□□□ -2.62
MSH6P52701 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
MSH6P52701 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.36□□□□□ -2.63
MSH6P52701 RNU6-752P-201ENST00000516376 102 ntBASIC-1.36□□□□□ -2.63
MSH6P52701 RNU7-153P-201ENST00000516455 62 ntBASIC-1.36□□□□□ -2.63
MSH6P52701 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 AL450471.1-201ENST00000447509 127 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 RNU7-154P-201ENST00000516194 62 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 MIR1246-201ENST00000636535 73 ntBASIC-1.37□□□□□ -2.63
MSH6P52701 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.38□□□□□ -2.63
MSH6P52701 MIR519A2-201ENST00000384990 87 ntBASIC-1.38□□□□□ -2.63
MSH6P52701 snosnR66.1-201ENST00000391095 99 ntBASIC-1.38□□□□□ -2.63
MSH6P52701 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.39□□□□□ -2.63
MSH6P52701 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
MSH6P52701 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.39□□□□□ -2.63
MSH6P52701 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.4□□□□□ -2.63
MSH6P52701 SNORD115-33-201ENST00000363723 82 ntBASIC-1.4□□□□□ -2.63
MSH6P52701 RNU6-340P-201ENST00000364005 107 ntBASIC-1.4□□□□□ -2.63
MSH6P52701 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.4□□□□□ -2.63
MSH6P52701 U7.3-201ENST00000616123 62 ntBASIC-1.4□□□□□ -2.63
MSH6P52701 RNU6-681P-201ENST00000364012 104 ntBASIC-1.41□□□□□ -2.64
MSH6P52701 RNU6-704P-201ENST00000364162 103 ntBASIC-1.41□□□□□ -2.64
MSH6P52701 RNU6-106P-201ENST00000384405 107 ntBASIC-1.41□□□□□ -2.64
MSH6P52701 SNORA26.4-201ENST00000391188 123 ntBASIC-1.41□□□□□ -2.64
MSH6P52701 HLA-S-202ENST00000425174 53 ntBASIC-1.42□□□□□ -2.64
MSH6P52701 RNU6-162P-201ENST00000516228 103 ntBASIC-1.42□□□□□ -2.64
MSH6P52701 RNU6-109P-201ENST00000516364 107 ntBASIC-1.42□□□□□ -2.64
MSH6P52701 RNU6-184P-201ENST00000516514 107 ntBASIC-1.42□□□□□ -2.64
MSH6P52701 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.43□□□□□ -2.64
MSH6P52701 SNORD63.1-201ENST00000516178 80 ntBASIC-1.43□□□□□ -2.64
MSH6P52701 RNU6-554P-201ENST00000410466 106 ntBASIC-1.44□□□□□ -2.64
MSH6P52701 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.44□□□□□ -2.64
MSH6P52701 MIR3133-201ENST00000583157 78 ntBASIC-1.44□□□□□ -2.64
MSH6P52701 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.45□□□□□ -2.64
MSH6P52701 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.45□□□□□ -2.64
MSH6P52701 RNU6-959P-201ENST00000384671 107 ntBASIC-1.45□□□□□ -2.64
MSH6P52701 AL021921.1-201ENST00000442774 93 ntBASIC-1.45□□□□□ -2.64
MSH6P52701 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.45□□□□□ -2.64
MSH6P52701 SNORD115-27-201ENST00000364430 82 ntBASIC-1.46□□□□□ -2.64
MSH6P52701 RNU6-746P-201ENST00000384112 109 ntBASIC-1.46□□□□□ -2.64
MSH6P52701 MIR519C-201ENST00000385053 87 ntBASIC-1.46□□□□□ -2.64
MSH6P52701 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
MSH6P52701 RNU6-518P-201ENST00000516056 96 ntBASIC-1.46□□□□□ -2.64
MSH6P52701 SNORD77.2-201ENST00000391045 68 ntBASIC-1.47□□□□□ -2.64
MSH6P52701 AC138207.3-201ENST00000585289 166 ntBASIC-1.47□□□□□ -2.64
MSH6P52701 RNU6-226P-201ENST00000363778 107 ntBASIC-1.47□□□□□ -2.65
MSH6P52701 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.48□□□□□ -2.65
MSH6P52701 MIR29B1-201ENST00000385015 81 ntBASIC-1.48□□□□□ -2.65
MSH6P52701 AL035461.1-201ENST00000421490 332 ntBASIC-1.48□□□□□ -2.65
MSH6P52701 AC008267.6-201ENST00000441664 139 ntBASIC-1.48□□□□□ -2.65
MSH6P52701 RNU6-656P-201ENST00000516785 107 ntBASIC-1.48□□□□□ -2.65
MSH6P52701 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.48□□□□□ -2.65
MSH6P52701 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.49□□□□□ -2.65
MSH6P52701 SNORD115-22-201ENST00000364456 82 ntBASIC-1.49□□□□□ -2.65
MSH6P52701 SNORA19-201ENST00000384737 128 ntBASIC-1.49□□□□□ -2.65
MSH6P52701 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
MSH6P52701 MIR8485-201ENST00000401372 91 ntBASIC-1.5□□□□□ -2.65
MSH6P52701 MTATP8P2-201ENST00000435212 202 ntBASIC-1.5□□□□□ -2.65
MSH6P52701 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.51□□□□□ -2.65
MSH6P52701 RNU6-766P-201ENST00000362478 107 ntBASIC-1.52□□□□□ -2.65
MSH6P52701 RNU6-633P-201ENST00000362612 103 ntBASIC-1.52□□□□□ -2.65
MSH6P52701 RNU6-774P-201ENST00000363238 107 ntBASIC-1.52□□□□□ -2.65
MSH6P52701 RNU6-209P-201ENST00000384118 107 ntBASIC-1.52□□□□□ -2.65
MSH6P52701 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.52□□□□□ -2.65
MSH6P52701 RNU6-624P-201ENST00000363411 107 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 RNU6-81P-201ENST00000365608 104 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.53□□□□□ -2.65
MSH6P52701 RNU6-479P-201ENST00000516348 105 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 RNU6-589P-201ENST00000516485 107 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 MIR5591-201ENST00000578248 65 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 MIR6129-201ENST00000616087 109 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 U2.7-201ENST00000619197 100 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 MIR6818-201ENST00000621576 65 ntBASIC-1.53□□□□□ -2.65
MSH6P52701 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.54□□□□□ -2.66
MSH6P52701 AL353691.2-201ENST00000443795 59 ntBASIC-1.54□□□□□ -2.66
MSH6P52701 RNU7-134P-201ENST00000458997 64 ntBASIC-1.54□□□□□ -2.66
MSH6P52701 AL365222.1-201ENST00000614661 98 ntBASIC-1.54□□□□□ -2.66
MSH6P52701 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.54□□□□□ -2.66
MSH6P52701 SNORD115-37-201ENST00000363768 82 ntBASIC-1.55□□□□□ -2.66
MSH6P52701 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms