Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RNU6-900P-201ENST00000384498 102 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 RNU6-455P-201ENST00000384681 107 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 MIRLET7B-201ENST00000385140 83 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 RNU7-55P-201ENST00000459426 62 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 AC090617.8-201ENST00000623339 167 ntBASIC-0.15□□□□□ -2.43
VPS41P49754 SNORD49B-201ENST00000365172 72 ntBASIC-0.16□□□□□ -2.44
VPS41P49754 RNU6-279P-201ENST00000391297 101 ntBASIC-0.16□□□□□ -2.44
VPS41P49754 MIR664A-201ENST00000626086 82 ntBASIC-0.16□□□□□ -2.44
VPS41P49754 U6.96-201ENST00000636425 70 ntBASIC-0.16□□□□□ -2.44
VPS41P49754 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
VPS41P49754 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.17□□□□□ -2.44
VPS41P49754 MIR2909-201ENST00000617113 69 ntBASIC-0.17□□□□□ -2.44
VPS41P49754 MIR6779-201ENST00000617283 64 ntBASIC-0.17□□□□□ -2.44
VPS41P49754 AL109933.3-201ENST00000619095 188 ntBASIC-0.17□□□□□ -2.44
VPS41P49754 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
VPS41P49754 RNU6-604P-201ENST00000390917 100 ntBASIC-0.18□□□□□ -2.44
VPS41P49754 RNU6-656P-201ENST00000516785 107 ntBASIC-0.18□□□□□ -2.44
VPS41P49754 SNORD45.1-201ENST00000363181 77 ntBASIC-0.19□□□□□ -2.44
VPS41P49754 RNU6-857P-201ENST00000515893 110 ntBASIC-0.19□□□□□ -2.44
VPS41P49754 SNORD115-22-201ENST00000364456 82 ntBASIC-0.2□□□□□ -2.44
VPS41P49754 SNORA72.7-201ENST00000516349 94 ntBASIC-0.2□□□□□ -2.44
VPS41P49754 SNORD115-23-201ENST00000364461 82 ntBASIC-0.21□□□□□ -2.44
VPS41P49754 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
VPS41P49754 RNU6-645P-201ENST00000364649 106 ntBASIC-0.21□□□□□ -2.44
VPS41P49754 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
VPS41P49754 MIR3134-201ENST00000579433 74 ntBASIC-0.21□□□□□ -2.44
VPS41P49754 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
VPS41P49754 RNA5SP225-201ENST00000410874 135 ntBASIC-0.22□□□□□ -2.44
VPS41P49754 CYP3A54P-201ENST00000566950 75 ntBASIC-0.22□□□□□ -2.44
VPS41P49754 AL590491.3-201ENST00000610731 82 ntBASIC-0.22□□□□□ -2.44
VPS41P49754 RNU6-973P-201ENST00000364690 107 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 RNU6-24P-201ENST00000384440 107 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS41P49754 RNU6-982P-201ENST00000516216 102 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 RNU6-881P-201ENST00000516813 102 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
VPS41P49754 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
VPS41P49754 RNU6-70P-201ENST00000516438 60 ntBASIC-0.24□□□□□ -2.45
VPS41P49754 MIR8053-201ENST00000613344 75 ntBASIC-0.24□□□□□ -2.45
VPS41P49754 SNORD56B-201ENST00000384713 71 ntBASIC-0.25□□□□□ -2.45
VPS41P49754 AC096531.1-201ENST00000419107 107 ntBASIC-0.25□□□□□ -2.45
VPS41P49754 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.25□□□□□ -2.45
VPS41P49754 U7.4-201ENST00000614961 63 ntBASIC-0.25□□□□□ -2.45
VPS41P49754 AL391099.1-201ENST00000624635 187 ntBASIC-0.25□□□□□ -2.45
VPS41P49754 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.26□□□□□ -2.45
VPS41P49754 SNORD113.1-201ENST00000363280 73 ntBASIC-0.27□□□□□ -2.45
VPS41P49754 MIR1255B2-201ENST00000408618 67 ntBASIC-0.27□□□□□ -2.45
VPS41P49754 RNU6-687P-201ENST00000516443 89 ntBASIC-0.27□□□□□ -2.45
VPS41P49754 uc_338.36-201ENST00000622331 158 ntBASIC-0.27□□□□□ -2.45
VPS41P49754 SNORD45A-201ENST00000384512 84 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 RNU6-587P-201ENST00000391282 106 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 U2.7-201ENST00000619197 100 ntBASIC-0.28□□□□□ -2.45
VPS41P49754 MIR4432-201ENST00000581823 84 ntBASIC-0.29□□□□□ -2.46
VPS41P49754 MIR4280-201ENST00000582178 76 ntBASIC-0.29□□□□□ -2.46
VPS41P49754 MIR4263-201ENST00000584745 83 ntBASIC-0.29□□□□□ -2.46
VPS41P49754 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
VPS41P49754 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.3□□□□□ -2.46
VPS41P49754 RNA5SP470-201ENST00000516463 106 ntBASIC-0.3□□□□□ -2.46
VPS41P49754 RNA5SP257-201ENST00000363023 116 ntBASIC-0.31□□□□□ -2.46
VPS41P49754 RNU6-411P-201ENST00000384451 107 ntBASIC-0.31□□□□□ -2.46
VPS41P49754 RNU6-901P-201ENST00000384593 106 ntBASIC-0.31□□□□□ -2.46
VPS41P49754 SNORD115-31-201ENST00000365318 82 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 MIR329-2-201ENST00000385029 84 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 MIR154-201ENST00000385243 84 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 RNU6-523P-201ENST00000516304 54 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 snoR1.1-201ENST00000628177 80 ntBASIC-0.32□□□□□ -2.46
VPS41P49754 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.33□□□□□ -2.46
VPS41P49754 MIR5704-201ENST00000584029 77 ntBASIC-0.33□□□□□ -2.46
VPS41P49754 AL353803.5-201ENST00000599815 141 ntBASIC-0.33□□□□□ -2.46
VPS41P49754 MIR4788-201ENST00000639104 80 ntBASIC-0.33□□□□□ -2.46
VPS41P49754 MIR519A2-201ENST00000384990 87 ntBASIC-0.34□□□□□ -2.46
VPS41P49754 AL021921.1-201ENST00000442774 93 ntBASIC-0.34□□□□□ -2.46
VPS41P49754 AC114755.3-201ENST00000481111 251 ntBASIC-0.34□□□□□ -2.46
VPS41P49754 RNU7-154P-201ENST00000516194 62 ntBASIC-0.34□□□□□ -2.46
VPS41P49754 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.34□□□□□ -2.46
VPS41P49754 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.35□□□□□ -2.47
VPS41P49754 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
VPS41P49754 MTND4LP1-201ENST00000446263 157 ntBASIC-0.35□□□□□ -2.47
VPS41P49754 MIR8068-201ENST00000618032 68 ntBASIC-0.35□□□□□ -2.47
VPS41P49754 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.35□□□□□ -2.47
VPS41P49754 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.36□□□□□ -2.47
VPS41P49754 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.36□□□□□ -2.47
VPS41P49754 SNORD116-24-201ENST00000384549 92 ntBASIC-0.36□□□□□ -2.47
VPS41P49754 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
VPS41P49754 RNU6-518P-201ENST00000516056 96 ntBASIC-0.36□□□□□ -2.47
VPS41P49754 MIR6851-201ENST00000617060 67 ntBASIC-0.36□□□□□ -2.47
VPS41P49754 SNORD114-11-201ENST00000363738 75 ntBASIC-0.37□□□□□ -2.47
VPS41P49754 RNU7-174P-201ENST00000516248 59 ntBASIC-0.37□□□□□ -2.47
VPS41P49754 MIR4464-201ENST00000580818 92 ntBASIC-0.37□□□□□ -2.47
VPS41P49754 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
VPS41P49754 AC093726.3-201ENST00000637588 150 ntBASIC-0.37□□□□□ -2.47
VPS41P49754 SNORA62.4-201ENST00000365504 151 ntBASIC-0.38□□□□□ -2.47
VPS41P49754 RNU6-634P-201ENST00000459134 106 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms