Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC025253.1-201ENST00000613623 543 ntBASIC-2.32□□□□□ -2.78
HTTP42858 RNA5SP173-201ENST00000364857 136 ntBASIC-2.32□□□□□ -2.78
HTTP42858 RNU6-768P-201ENST00000384683 107 ntBASIC-2.32□□□□□ -2.78
HTTP42858 RNU6-835P-201ENST00000516974 104 ntBASIC-2.32□□□□□ -2.78
HTTP42858 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.33□□□□□ -2.78
HTTP42858 SNORA63-201ENST00000363450 132 ntBASIC-2.33□□□□□ -2.78
HTTP42858 SNORD81.2-201ENST00000365153 76 ntBASIC-2.33□□□□□ -2.78
HTTP42858 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.33□□□□□ -2.78
HTTP42858 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.33□□□□□ -2.78
HTTP42858 AC130289.1-201ENST00000577321 73 ntBASIC-2.33□□□□□ -2.78
HTTP42858 RNU6-854P-201ENST00000364036 107 ntBASIC-2.33□□□□□ -2.78
HTTP42858 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.33□□□□□ -2.78
HTTP42858 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.33□□□□□ -2.78
HTTP42858 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.33□□□□□ -2.78
HTTP42858 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.33□□□□□ -2.78
HTTP42858 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.33□□□□□ -2.78
HTTP42858 U6.104-201ENST00000637979 90 ntBASIC-2.33□□□□□ -2.78
HTTP42858 SEPT14P3-201ENST00000439401 183 ntBASIC-2.33□□□□□ -2.78
HTTP42858 AL732372.2-207ENST00000445840 183 ntBASIC-2.33□□□□□ -2.78
HTTP42858 SEPT14P2-201ENST00000453405 183 ntBASIC-2.33□□□□□ -2.78
HTTP42858 FO082796.1-201ENST00000523795 183 ntBASIC-2.33□□□□□ -2.78
HTTP42858 MIR3915-201ENST00000578518 97 ntBASIC-2.33□□□□□ -2.78
HTTP42858 MIR4509-3-201ENST00000578671 94 ntBASIC-2.34□□□□□ -2.78
HTTP42858 MIR4509-2-201ENST00000583920 94 ntBASIC-2.34□□□□□ -2.78
HTTP42858 MIR4509-1-201ENST00000618224 94 ntBASIC-2.34□□□□□ -2.78
HTTP42858 SNORA75.5-201ENST00000391291 81 ntBASIC-2.34□□□□□ -2.78
HTTP42858 SNORD60.1-201ENST00000362451 73 ntBASIC-2.35□□□□□ -2.78
HTTP42858 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.35□□□□□ -2.78
HTTP42858 RNU4-40P-201ENST00000364351 143 ntBASIC-2.35□□□□□ -2.78
HTTP42858 RNU6-162P-201ENST00000516228 103 ntBASIC-2.35□□□□□ -2.78
HTTP42858 RNU6-267P-201ENST00000516714 103 ntBASIC-2.35□□□□□ -2.78
HTTP42858 MIR3121-201ENST00000579680 77 ntBASIC-2.35□□□□□ -2.78
HTTP42858 MIR6844-201ENST00000637122 62 ntBASIC-2.35□□□□□ -2.78
HTTP42858 SNORD115-45-201ENST00000391078 81 ntBASIC-2.35□□□□□ -2.79
HTTP42858 RNA5SP224-201ENST00000365069 126 ntBASIC-2.35□□□□□ -2.79
HTTP42858 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.35□□□□□ -2.79
HTTP42858 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.35□□□□□ -2.79
HTTP42858 RNU6-537P-201ENST00000517277 103 ntBASIC-2.35□□□□□ -2.79
HTTP42858 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.36□□□□□ -2.79
HTTP42858 MIR363-201ENST00000384840 75 ntBASIC-2.36□□□□□ -2.79
HTTP42858 AC024614.3-201ENST00000637860 256 ntBASIC-2.36□□□□□ -2.79
HTTP42858 RNU6-303P-201ENST00000517091 106 ntBASIC-2.37□□□□□ -2.79
HTTP42858 AC015540.1-201ENST00000615828 501 ntBASIC-2.37□□□□□ -2.79
HTTP42858 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
HTTP42858 AL445567.1-201ENST00000439121 144 ntBASIC-2.37□□□□□ -2.79
HTTP42858 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.37□□□□□ -2.79
HTTP42858 SNORD116-6-201ENST00000384711 96 ntBASIC-2.37□□□□□ -2.79
HTTP42858 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
HTTP42858 MIR1302-6-201ENST00000408466 90 ntBASIC-2.37□□□□□ -2.79
HTTP42858 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.37□□□□□ -2.79
HTTP42858 MIR5009-201ENST00000578736 100 ntBASIC-2.37□□□□□ -2.79
HTTP42858 MIR548D2-201ENST00000384955 97 ntBASIC-2.38□□□□□ -2.79
HTTP42858 RNU6-788P-201ENST00000390967 104 ntBASIC-2.38□□□□□ -2.79
HTTP42858 RNU7-119P-201ENST00000459279 63 ntBASIC-2.38□□□□□ -2.79
HTTP42858 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.38□□□□□ -2.79
HTTP42858 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.38□□□□□ -2.79
HTTP42858 RNU6-1085P-201ENST00000363576 107 ntBASIC-2.38□□□□□ -2.79
HTTP42858 SNORD116.2-201ENST00000391251 93 ntBASIC-2.38□□□□□ -2.79
HTTP42858 MTND2P14-201ENST00000482139 351 ntBASIC-2.38□□□□□ -2.79
HTTP42858 MIR4272-201ENST00000635924 64 ntBASIC-2.38□□□□□ -2.79
HTTP42858 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.39□□□□□ -2.79
HTTP42858 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.39□□□□□ -2.79
HTTP42858 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.39□□□□□ -2.79
HTTP42858 RPS29P30-201ENST00000600975 111 ntBASIC-2.39□□□□□ -2.79
HTTP42858 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.39□□□□□ -2.79
HTTP42858 SCARNA23-201ENST00000516060 130 ntBASIC-2.39□□□□□ -2.79
HTTP42858 AL035470.1-201ENST00000622571 220 ntBASIC-2.39□□□□□ -2.79
HTTP42858 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.4□□□□□ -2.79
HTTP42858 RNU6-326P-201ENST00000365480 107 ntBASIC-2.4□□□□□ -2.79
HTTP42858 RNU6-813P-201ENST00000384691 107 ntBASIC-2.4□□□□□ -2.79
HTTP42858 MIR4694-201ENST00000578534 80 ntBASIC-2.4□□□□□ -2.79
HTTP42858 SNORD113.1-201ENST00000363280 73 ntBASIC-2.4□□□□□ -2.79
HTTP42858 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.4□□□□□ -2.79
HTTP42858 MIR513B-201ENST00000385136 84 ntBASIC-2.4□□□□□ -2.79
HTTP42858 SNORA40B-201ENST00000385573 128 ntBASIC-2.4□□□□□ -2.79
HTTP42858 AC103810.7-201ENST00000607821 91 ntBASIC-2.4□□□□□ -2.79
HTTP42858 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.41□□□□□ -2.79
HTTP42858 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.41□□□□□ -2.79
HTTP42858 SNORA26.8-201ENST00000391306 124 ntBASIC-2.41□□□□□ -2.79
HTTP42858 AP001318.4-201ENST00000616637 121 ntBASIC-2.41□□□□□ -2.79
HTTP42858 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.41□□□□□ -2.8
HTTP42858 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.41□□□□□ -2.8
HTTP42858 RNU6-789P-201ENST00000517105 102 ntBASIC-2.41□□□□□ -2.8
HTTP42858 RNU6-639P-201ENST00000384074 107 ntBASIC-2.42□□□□□ -2.8
HTTP42858 MIR1263-201ENST00000408324 86 ntBASIC-2.42□□□□□ -2.8
HTTP42858 RNU6-419P-201ENST00000517030 63 ntBASIC-2.42□□□□□ -2.8
HTTP42858 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.42□□□□□ -2.8
HTTP42858 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.42□□□□□ -2.8
HTTP42858 RNU6-908P-201ENST00000410160 94 ntBASIC-2.42□□□□□ -2.8
HTTP42858 MIR4796-201ENST00000580742 81 ntBASIC-2.42□□□□□ -2.8
HTTP42858 AC104985.2-201ENST00000620598 500 ntBASIC-2.42□□□□□ -2.8
HTTP42858 SNORD113-6-201ENST00000363345 75 ntBASIC-2.42□□□□□ -2.8
HTTP42858 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.42□□□□□ -2.8
HTTP42858 RNY3P2-201ENST00000362918 102 ntBASIC-2.43□□□□□ -2.8
HTTP42858 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.43□□□□□ -2.8
HTTP42858 RNU6-121P-201ENST00000410525 99 ntBASIC-2.43□□□□□ -2.8
HTTP42858 RNA5SP449-201ENST00000516871 130 ntBASIC-2.43□□□□□ -2.8
HTTP42858 Z99129.1-201ENST00000612510 255 ntBASIC-2.43□□□□□ -2.8
HTTP42858 RNU6-290P-201ENST00000365212 101 ntBASIC-2.43□□□□□ -2.8
HTTP42858 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 326.1 ms