Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR4712-201ENST00000583750 82 ntBASIC-0.16□□□□□ -2.44
VAMP1P23763 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
VAMP1P23763 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 SNORD49B-201ENST00000365172 72 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 RNU6-455P-201ENST00000384681 107 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 MIR8064-201ENST00000612863 90 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 MIR6086-201ENST00000638065 55 ntBASIC-0.18□□□□□ -2.44
VAMP1P23763 RNU6-573P-201ENST00000383938 106 ntBASIC-0.19□□□□□ -2.44
VAMP1P23763 snoU13.19-201ENST00000459148 104 ntBASIC-0.19□□□□□ -2.44
VAMP1P23763 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.19□□□□□ -2.44
VAMP1P23763 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
VAMP1P23763 AC074348.1-201ENST00000426503 132 ntBASIC-0.2□□□□□ -2.44
VAMP1P23763 RNU6-901P-201ENST00000384593 106 ntBASIC-0.21□□□□□ -2.44
VAMP1P23763 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
VAMP1P23763 RNU6-758P-201ENST00000516292 89 ntBASIC-0.21□□□□□ -2.44
VAMP1P23763 SNORA40.17-201ENST00000517256 115 ntBASIC-0.21□□□□□ -2.44
VAMP1P23763 MIR4263-201ENST00000584745 83 ntBASIC-0.21□□□□□ -2.44
VAMP1P23763 snoR1.1-201ENST00000628177 80 ntBASIC-0.21□□□□□ -2.44
VAMP1P23763 SNORA49-201ENST00000386157 136 ntBASIC-0.22□□□□□ -2.44
VAMP1P23763 MIR6507-201ENST00000613630 70 ntBASIC-0.22□□□□□ -2.44
VAMP1P23763 SNORA18.1-201ENST00000363418 128 ntBASIC-0.23□□□□□ -2.45
VAMP1P23763 RNU6-330P-201ENST00000363015 107 ntBASIC-0.24□□□□□ -2.45
VAMP1P23763 SNORD45.1-201ENST00000363181 77 ntBASIC-0.24□□□□□ -2.45
VAMP1P23763 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.24□□□□□ -2.45
VAMP1P23763 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.24□□□□□ -2.45
VAMP1P23763 MIR4636-201ENST00000582271 80 ntBASIC-0.24□□□□□ -2.45
VAMP1P23763 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
VAMP1P23763 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
VAMP1P23763 SNORD114-15-201ENST00000364687 72 ntBASIC-0.26□□□□□ -2.45
VAMP1P23763 AC244250.2-201ENST00000418731 148 ntBASIC-0.26□□□□□ -2.45
VAMP1P23763 MIR6773-201ENST00000612812 74 ntBASIC-0.26□□□□□ -2.45
VAMP1P23763 MIR604-201ENST00000384880 94 ntBASIC-0.27□□□□□ -2.45
VAMP1P23763 RNA5SP451-201ENST00000410588 110 ntBASIC-0.27□□□□□ -2.45
VAMP1P23763 HAR1A.1-201ENST00000459583 118 ntBASIC-0.27□□□□□ -2.45
VAMP1P23763 RNA5SP368-201ENST00000364298 116 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 RNU6-900P-201ENST00000384498 102 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 MIR521-2-201ENST00000384818 87 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 RNA5SP25-201ENST00000410815 110 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 RNA5SP67-201ENST00000516422 131 ntBASIC-0.28□□□□□ -2.45
VAMP1P23763 SNORA33.1-201ENST00000364957 130 ntBASIC-0.29□□□□□ -2.46
VAMP1P23763 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.29□□□□□ -2.46
VAMP1P23763 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
VAMP1P23763 RNU6-502P-201ENST00000362419 108 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 RNU6-787P-201ENST00000384032 107 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 RNU6-604P-201ENST00000390917 100 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 RPS29P8-201ENST00000445109 171 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 uc_338.36-201ENST00000622331 158 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 MIR6739-201ENST00000622461 75 ntBASIC-0.3□□□□□ -2.46
VAMP1P23763 MIR224-201ENST00000384889 81 ntBASIC-0.31□□□□□ -2.46
VAMP1P23763 SNORA72.7-201ENST00000516349 94 ntBASIC-0.31□□□□□ -2.46
VAMP1P23763 MIR4493-201ENST00000584016 73 ntBASIC-0.31□□□□□ -2.46
VAMP1P23763 MIR8053-201ENST00000613344 75 ntBASIC-0.31□□□□□ -2.46
VAMP1P23763 RNU6-30P-201ENST00000384561 107 ntBASIC-0.32□□□□□ -2.46
VAMP1P23763 RNU6-70P-201ENST00000516438 60 ntBASIC-0.32□□□□□ -2.46
VAMP1P23763 RNA5SP476-201ENST00000516613 103 ntBASIC-0.32□□□□□ -2.46
VAMP1P23763 MIR3666-201ENST00000607845 111 ntBASIC-0.32□□□□□ -2.46
VAMP1P23763 MIR548C-201ENST00000384815 97 ntBASIC-0.33□□□□□ -2.46
VAMP1P23763 MIR1255A-201ENST00000408338 113 ntBASIC-0.33□□□□□ -2.46
VAMP1P23763 MIR4802-201ENST00000581881 80 ntBASIC-0.33□□□□□ -2.46
VAMP1P23763 SNORD78.1-201ENST00000390866 65 ntBASIC-0.34□□□□□ -2.46
VAMP1P23763 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.34□□□□□ -2.46
VAMP1P23763 MIR3681-201ENST00000580089 72 ntBASIC-0.34□□□□□ -2.46
VAMP1P23763 AC108676.2-201ENST00000605225 163 ntBASIC-0.34□□□□□ -2.46
VAMP1P23763 MIR101-1-201ENST00000362265 75 ntBASIC-0.35□□□□□ -2.47
VAMP1P23763 AC145423.2-201ENST00000610631 239 ntBASIC-0.35□□□□□ -2.47
VAMP1P23763 MIR9-2-201ENST00000384838 87 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 MIR154-201ENST00000385243 84 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 AL445193.1-201ENST00000441183 141 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 SCARNA18B-201ENST00000458806 135 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 U7.4-201ENST00000614961 63 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 AL391099.1-201ENST00000624635 187 ntBASIC-0.36□□□□□ -2.47
VAMP1P23763 RNU6-228P-201ENST00000362700 106 ntBASIC-0.37□□□□□ -2.47
VAMP1P23763 RNU6-645P-201ENST00000364649 106 ntBASIC-0.37□□□□□ -2.47
VAMP1P23763 MIRLET7B-201ENST00000385140 83 ntBASIC-0.37□□□□□ -2.47
VAMP1P23763 MTND4LP1-201ENST00000446263 157 ntBASIC-0.37□□□□□ -2.47
VAMP1P23763 SNORD57-201ENST00000448188 72 ntBASIC-0.37□□□□□ -2.47
VAMP1P23763 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
VAMP1P23763 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
VAMP1P23763 CYP3A54P-201ENST00000566950 75 ntBASIC-0.39□□□□□ -2.47
VAMP1P23763 RNU6-973P-201ENST00000364690 107 ntBASIC-0.4□□□□□ -2.47
VAMP1P23763 RNU7-55P-201ENST00000459426 62 ntBASIC-0.4□□□□□ -2.47
VAMP1P23763 MIR4788-201ENST00000639104 80 ntBASIC-0.4□□□□□ -2.47
VAMP1P23763 RNU6-895P-201ENST00000384125 103 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 RNU6-337P-201ENST00000391243 106 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 MIR1255B2-201ENST00000408618 67 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 RNA5SP470-201ENST00000516463 106 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 RNA5SP66-201ENST00000517178 101 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 MIR4432-201ENST00000581823 84 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 MIR664A-201ENST00000626086 82 ntBASIC-0.41□□□□□ -2.48
VAMP1P23763 RNU6-24P-201ENST00000384440 107 ntBASIC-0.42□□□□□ -2.48
VAMP1P23763 SNORD75.1-201ENST00000408373 60 ntBASIC-0.42□□□□□ -2.48
VAMP1P23763 RNU6-857P-201ENST00000515893 110 ntBASIC-0.43□□□□□ -2.48
VAMP1P23763 AL627230.5-201ENST00000619807 58 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms