Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-337P-201ENST00000391243 106 ntBASIC1.01□□□□□ -2.25
THBS1P07996 MIR548X-201ENST00000580069 75 ntBASIC1.01□□□□□ -2.25
THBS1P07996 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.01□□□□□ -2.25
THBS1P07996 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
THBS1P07996 RNU6-110P-201ENST00000384508 104 ntBASIC1□□□□□ -2.25
THBS1P07996 MIRLET7B-201ENST00000385140 83 ntBASIC1□□□□□ -2.25
THBS1P07996 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
THBS1P07996 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
THBS1P07996 AC084368.1-201ENST00000620935 65 ntBASIC1□□□□□ -2.25
THBS1P07996 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
THBS1P07996 RNU6-172P-201ENST00000411000 93 ntBASIC0.99□□□□□ -2.25
THBS1P07996 RPS29P1-201ENST00000465274 159 ntBASIC0.99□□□□□ -2.25
THBS1P07996 MIR4677-201ENST00000584153 80 ntBASIC0.99□□□□□ -2.25
THBS1P07996 Y_RNA.423-201ENST00000384057 113 ntBASIC0.98□□□□□ -2.25
THBS1P07996 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
THBS1P07996 RNU6-863P-201ENST00000515989 104 ntBASIC0.98□□□□□ -2.25
THBS1P07996 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
THBS1P07996 SNORD1B-201ENST00000363091 84 ntBASIC0.97□□□□□ -2.25
THBS1P07996 Y_RNA.178-201ENST00000363832 102 ntBASIC0.97□□□□□ -2.25
THBS1P07996 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
THBS1P07996 SNORA49-201ENST00000386157 136 ntBASIC0.97□□□□□ -2.25
THBS1P07996 RNU6-175P-201ENST00000516896 107 ntBASIC0.97□□□□□ -2.25
THBS1P07996 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
THBS1P07996 RNU6-502P-201ENST00000362419 108 ntBASIC0.96□□□□□ -2.26
THBS1P07996 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.96□□□□□ -2.26
THBS1P07996 RNU6-810P-201ENST00000364001 107 ntBASIC0.95□□□□□ -2.26
THBS1P07996 RNU6-1036P-201ENST00000383959 104 ntBASIC0.95□□□□□ -2.26
THBS1P07996 RNU6-458P-201ENST00000384179 107 ntBASIC0.95□□□□□ -2.26
THBS1P07996 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
THBS1P07996 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
THBS1P07996 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
THBS1P07996 U6.58-201ENST00000613107 107 ntBASIC0.95□□□□□ -2.26
THBS1P07996 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
THBS1P07996 Y_RNA.30-201ENST00000362572 97 ntBASIC0.94□□□□□ -2.26
THBS1P07996 Y_RNA.109-201ENST00000363215 102 ntBASIC0.94□□□□□ -2.26
THBS1P07996 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
THBS1P07996 MIR501-201ENST00000390204 84 ntBASIC0.94□□□□□ -2.26
THBS1P07996 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
THBS1P07996 RNU6-930P-201ENST00000390938 100 ntBASIC0.94□□□□□ -2.26
THBS1P07996 MIR548J-201ENST00000408833 112 ntBASIC0.94□□□□□ -2.26
THBS1P07996 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
THBS1P07996 RNU6-782P-201ENST00000516852 104 ntBASIC0.94□□□□□ -2.26
THBS1P07996 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
THBS1P07996 MIR760-201ENST00000390220 80 ntBASIC0.93□□□□□ -2.26
THBS1P07996 RNU7-160P-201ENST00000516660 62 ntBASIC0.93□□□□□ -2.26
THBS1P07996 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.93□□□□□ -2.26
THBS1P07996 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
THBS1P07996 RNA5SP128-201ENST00000365305 116 ntBASIC0.91□□□□□ -2.26
THBS1P07996 RNU6-35P-201ENST00000384530 107 ntBASIC0.91□□□□□ -2.26
THBS1P07996 MIR876-201ENST00000401147 81 ntBASIC0.91□□□□□ -2.26
THBS1P07996 AC098934.3-201ENST00000430450 190 ntBASIC0.91□□□□□ -2.26
THBS1P07996 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
THBS1P07996 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
THBS1P07996 MIR106A-201ENST00000384870 81 ntBASIC0.89□□□□□ -2.27
THBS1P07996 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
THBS1P07996 MIR6755-201ENST00000619993 66 ntBASIC0.89□□□□□ -2.27
THBS1P07996 RNU6-1232P-201ENST00000516299 86 ntBASIC0.88□□□□□ -2.27
THBS1P07996 RNU6-419P-201ENST00000517030 63 ntBASIC0.88□□□□□ -2.27
THBS1P07996 AL353803.5-201ENST00000599815 141 ntBASIC0.88□□□□□ -2.27
THBS1P07996 snoR1.1-201ENST00000628177 80 ntBASIC0.88□□□□□ -2.27
THBS1P07996 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
THBS1P07996 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
THBS1P07996 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.87□□□□□ -2.27
THBS1P07996 MIR548AG1-201ENST00000579932 66 ntBASIC0.87□□□□□ -2.27
THBS1P07996 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
THBS1P07996 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
THBS1P07996 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
THBS1P07996 RNU6-838P-201ENST00000363399 108 ntBASIC0.85□□□□□ -2.27
THBS1P07996 RNU6-995P-201ENST00000391244 107 ntBASIC0.85□□□□□ -2.27
THBS1P07996 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
THBS1P07996 RNU4-54P-201ENST00000516428 129 ntBASIC0.85□□□□□ -2.27
THBS1P07996 RN7SL660P-201ENST00000614852 299 ntBASIC0.85□□□□□ -2.27
THBS1P07996 SNORD115-23-201ENST00000364461 82 ntBASIC0.84□□□□□ -2.27
THBS1P07996 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
THBS1P07996 MIR4490-201ENST00000582647 84 ntBASIC0.84□□□□□ -2.27
THBS1P07996 RNU6-247P-201ENST00000362636 107 ntBASIC0.83□□□□□ -2.28
THBS1P07996 RNU6-1206P-201ENST00000516339 103 ntBASIC0.83□□□□□ -2.28
THBS1P07996 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
THBS1P07996 Y_RNA.68-201ENST00000362881 102 ntBASIC0.82□□□□□ -2.28
THBS1P07996 RNA5SP98-201ENST00000363158 137 ntBASIC0.82□□□□□ -2.28
THBS1P07996 MIR548AA1-201ENST00000384971 97 ntBASIC0.82□□□□□ -2.28
THBS1P07996 MIR548F3-201ENST00000408509 87 ntBASIC0.82□□□□□ -2.28
THBS1P07996 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
THBS1P07996 RNU7-129P-201ENST00000516128 62 ntBASIC0.82□□□□□ -2.28
THBS1P07996 AC108676.2-201ENST00000605225 163 ntBASIC0.82□□□□□ -2.28
THBS1P07996 MIR193B-201ENST00000384907 83 ntBASIC0.81□□□□□ -2.28
THBS1P07996 AP000676.1-201ENST00000533307 52 ntBASIC0.81□□□□□ -2.28
THBS1P07996 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
THBS1P07996 MIR3925-201ENST00000584674 77 ntBASIC0.81□□□□□ -2.28
THBS1P07996 SNORA62.4-201ENST00000365504 151 ntBASIC0.8□□□□□ -2.28
THBS1P07996 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
THBS1P07996 RNU6-696P-201ENST00000390834 107 ntBASIC0.8□□□□□ -2.28
THBS1P07996 SCARNA11.2-201ENST00000517183 154 ntBASIC0.8□□□□□ -2.28
THBS1P07996 MIR4432-201ENST00000581823 84 ntBASIC0.8□□□□□ -2.28
THBS1P07996 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
THBS1P07996 RNU6-598P-201ENST00000364017 105 ntBASIC0.79□□□□□ -2.28
THBS1P07996 RNU6-828P-201ENST00000364876 107 ntBASIC0.79□□□□□ -2.28
THBS1P07996 RNU7-151P-201ENST00000516930 53 ntBASIC0.79□□□□□ -2.28
THBS1P07996 MIR1273G-201ENST00000577677 100 ntBASIC0.79□□□□□ -2.28
THBS1P07996 Y_RNA.69-201ENST00000362885 109 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 373.6 ms