Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.71□□□□□ -2.52
COL4A1P02462 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
COL4A1P02462 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.71□□□□□ -2.52
COL4A1P02462 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.72□□□□□ -2.52
COL4A1P02462 SCARNA18B-201ENST00000458806 135 ntBASIC-0.72□□□□□ -2.52
COL4A1P02462 RNU7-61P-201ENST00000515897 61 ntBASIC-0.72□□□□□ -2.52
COL4A1P02462 RNU6-706P-201ENST00000517229 104 ntBASIC-0.72□□□□□ -2.52
COL4A1P02462 MIR4464-201ENST00000580818 92 ntBASIC-0.72□□□□□ -2.52
COL4A1P02462 MIR147A-201ENST00000385079 72 ntBASIC-0.72□□□□□ -2.53
COL4A1P02462 MIR496-201ENST00000385226 102 ntBASIC-0.72□□□□□ -2.53
COL4A1P02462 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.72□□□□□ -2.53
COL4A1P02462 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 RNU6-226P-201ENST00000363778 107 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 RNY1P5-201ENST00000383890 115 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 RNU6-959P-201ENST00000384671 107 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 RNU7-153P-201ENST00000516455 62 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.73□□□□□ -2.53
COL4A1P02462 SNORD116-10-201ENST00000363791 102 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 SNORA26.4-201ENST00000391188 123 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 AC140658.3-201ENST00000567603 271 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 MIR4796-201ENST00000580742 81 ntBASIC-0.74□□□□□ -2.53
COL4A1P02462 SNORA2.1-201ENST00000363089 137 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 RNU6-624P-201ENST00000363411 107 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 SNORD116-21-201ENST00000384507 92 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 SNORD33.1-201ENST00000516213 88 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 U7.5-201ENST00000517224 61 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 RNU6-704P-201ENST00000364162 103 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
COL4A1P02462 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.75□□□□□ -2.53
COL4A1P02462 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 SNORD115-33-201ENST00000363723 82 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 RNU6-340P-201ENST00000364005 107 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 RNU6-106P-201ENST00000384405 107 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 MIR590-201ENST00000385008 97 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 AL450471.1-201ENST00000447509 127 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 SNORD63.1-201ENST00000516178 80 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 RNU7-154P-201ENST00000516194 62 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 RNU6-904P-201ENST00000516206 101 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 RNU6-656P-201ENST00000516785 107 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 snoU83B.1-201ENST00000517136 88 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 MIR3675-201ENST00000583661 73 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.76□□□□□ -2.53
COL4A1P02462 U6.95-201ENST00000636931 70 ntBASIC-0.76□□□□□ -2.53
COL4A1P02462 MIR519C-201ENST00000385053 87 ntBASIC-0.77□□□□□ -2.53
COL4A1P02462 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL4A1P02462 RNU5F-1-201ENST00000362507 117 ntBASIC-0.78□□□□□ -2.53
COL4A1P02462 RNU6-255P-201ENST00000516957 105 ntBASIC-0.78□□□□□ -2.53
COL4A1P02462 AC090425.1-201ENST00000610007 140 ntBASIC-0.78□□□□□ -2.53
COL4A1P02462 HLA-S-202ENST00000425174 53 ntBASIC-0.78□□□□□ -2.53
COL4A1P02462 U7.3-201ENST00000616123 62 ntBASIC-0.78□□□□□ -2.53
COL4A1P02462 MIR1302-5-201ENST00000408164 150 ntBASIC-0.79□□□□□ -2.54
COL4A1P02462 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.79□□□□□ -2.54
COL4A1P02462 SNORD115-27-201ENST00000364430 82 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 MTATP8P2-201ENST00000435212 202 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 RNU6-162P-201ENST00000516228 103 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.8□□□□□ -2.54
COL4A1P02462 SNORD115-22-201ENST00000364456 82 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 RNU6-540P-201ENST00000384622 101 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 MIR4490-201ENST00000582647 84 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 MIR6129-201ENST00000616087 109 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 MIR2052-201ENST00000636055 55 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 U6.81-201ENST00000612550 106 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 AC091912.2-201ENST00000624798 167 ntBASIC-0.81□□□□□ -2.54
COL4A1P02462 SNORD115-37-201ENST00000363768 82 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 RNU6-746P-201ENST00000384112 109 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 SNORD116-22-201ENST00000384430 92 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 SNORD19-201ENST00000391191 68 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 AL035461.1-201ENST00000421490 332 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 RNU6-109P-201ENST00000516364 107 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 RNU6-184P-201ENST00000516514 107 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 AP002795.1-201ENST00000534879 84 ntBASIC-0.82□□□□□ -2.54
COL4A1P02462 RNU6-633P-201ENST00000362612 103 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORD116-14-201ENST00000383894 92 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORD116-17-201ENST00000383929 92 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORD116-15-201ENST00000384445 92 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORD116-19-201ENST00000384729 92 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORA19-201ENST00000384737 128 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 SNORD77.2-201ENST00000391045 68 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 MIR8485-201ENST00000401372 91 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 AL021921.1-201ENST00000442774 93 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 RNU7-88P-201ENST00000458752 63 ntBASIC-0.83□□□□□ -2.54
COL4A1P02462 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.84□□□□□ -2.54
COL4A1P02462 AC138207.3-201ENST00000585289 166 ntBASIC-0.84□□□□□ -2.54
COL4A1P02462 RNU6-774P-201ENST00000363238 107 ntBASIC-0.84□□□□□ -2.54
COL4A1P02462 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.84□□□□□ -2.54
COL4A1P02462 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.84□□□□□ -2.54
COL4A1P02462 RNU6-81P-201ENST00000365608 104 ntBASIC-0.84□□□□□ -2.54
COL4A1P02462 MIR527-201ENST00000385244 85 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 293.4 ms