Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.443-201ENST00000384135 111 ntBASIC0.34□□□□□ -2.36
LDLRP01130 MIR521-2-201ENST00000384818 87 ntBASIC0.34□□□□□ -2.36
LDLRP01130 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
LDLRP01130 AC021146.9-201ENST00000512503 156 ntBASIC0.34□□□□□ -2.36
LDLRP01130 RNU7-188P-201ENST00000517063 64 ntBASIC0.34□□□□□ -2.36
LDLRP01130 AC244090.1-201ENST00000441884 93 ntBASIC0.33□□□□□ -2.36
LDLRP01130 RN7SL660P-201ENST00000614852 299 ntBASIC0.33□□□□□ -2.36
LDLRP01130 AC090617.8-201ENST00000623339 167 ntBASIC0.33□□□□□ -2.36
LDLRP01130 MIR6759-201ENST00000638110 65 ntBASIC0.33□□□□□ -2.36
LDLRP01130 MIR20A-201ENST00000362279 71 ntBASIC0.32□□□□□ -2.36
LDLRP01130 U7.6-201ENST00000610841 64 ntBASIC0.32□□□□□ -2.36
LDLRP01130 RNU6-668P-201ENST00000364180 107 ntBASIC0.31□□□□□ -2.36
LDLRP01130 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
LDLRP01130 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
LDLRP01130 MIR876-201ENST00000401147 81 ntBASIC0.31□□□□□ -2.36
LDLRP01130 SNORA25.4-201ENST00000363666 124 ntBASIC0.3□□□□□ -2.36
LDLRP01130 SNORD114-29-201ENST00000364819 70 ntBASIC0.3□□□□□ -2.36
LDLRP01130 Y_RNA.375-201ENST00000365625 101 ntBASIC0.3□□□□□ -2.36
LDLRP01130 SNORA15B-2-201ENST00000384058 135 ntBASIC0.3□□□□□ -2.36
LDLRP01130 SNORA15B-1-201ENST00000384334 135 ntBASIC0.3□□□□□ -2.36
LDLRP01130 RNU6-1162P-201ENST00000384443 104 ntBASIC0.3□□□□□ -2.36
LDLRP01130 RNU6-337P-201ENST00000391243 106 ntBASIC0.3□□□□□ -2.36
LDLRP01130 MTND4LP1-201ENST00000446263 157 ntBASIC0.3□□□□□ -2.36
LDLRP01130 RNU6-1089P-201ENST00000516473 104 ntBASIC0.3□□□□□ -2.36
LDLRP01130 MIR6718-201ENST00000616153 80 ntBASIC0.3□□□□□ -2.36
LDLRP01130 RNU6-471P-201ENST00000383944 106 ntBASIC0.29□□□□□ -2.36
LDLRP01130 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
LDLRP01130 MIR548H2-201ENST00000408874 88 ntBASIC0.29□□□□□ -2.36
LDLRP01130 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
LDLRP01130 U2.7-201ENST00000619197 100 ntBASIC0.29□□□□□ -2.36
LDLRP01130 AC084368.1-201ENST00000620935 65 ntBASIC0.29□□□□□ -2.36
LDLRP01130 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
LDLRP01130 RNA5SP299-201ENST00000391203 116 ntBASIC0.28□□□□□ -2.36
LDLRP01130 RNU7-129P-201ENST00000516128 62 ntBASIC0.28□□□□□ -2.36
LDLRP01130 MIR4511-201ENST00000582784 87 ntBASIC0.28□□□□□ -2.36
LDLRP01130 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
LDLRP01130 Y_RNA.340-201ENST00000365330 92 ntBASIC0.27□□□□□ -2.37
LDLRP01130 RNU6-1036P-201ENST00000383959 104 ntBASIC0.27□□□□□ -2.37
LDLRP01130 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
LDLRP01130 SCARNA11.2-201ENST00000517183 154 ntBASIC0.27□□□□□ -2.37
LDLRP01130 AC069113.3-201ENST00000521019 150 ntBASIC0.27□□□□□ -2.37
LDLRP01130 CYP3A54P-201ENST00000566950 75 ntBASIC0.27□□□□□ -2.37
LDLRP01130 SNORA9.1-201ENST00000362412 131 ntBASIC0.26□□□□□ -2.37
LDLRP01130 RNU7-174P-201ENST00000516248 59 ntBASIC0.26□□□□□ -2.37
LDLRP01130 RNU6-782P-201ENST00000516852 104 ntBASIC0.26□□□□□ -2.37
LDLRP01130 MIR4636-201ENST00000582271 80 ntBASIC0.26□□□□□ -2.37
LDLRP01130 MIR6773-201ENST00000612812 74 ntBASIC0.26□□□□□ -2.37
LDLRP01130 U6.96-201ENST00000636425 70 ntBASIC0.26□□□□□ -2.37
LDLRP01130 RNU6-502P-201ENST00000362419 108 ntBASIC0.25□□□□□ -2.37
LDLRP01130 RNA5SP215-201ENST00000363440 122 ntBASIC0.25□□□□□ -2.37
LDLRP01130 MIR106A-201ENST00000384870 81 ntBASIC0.25□□□□□ -2.37
LDLRP01130 MIR9-2-201ENST00000384838 87 ntBASIC0.24□□□□□ -2.37
LDLRP01130 AC125388.1-201ENST00000459631 156 ntBASIC0.24□□□□□ -2.37
LDLRP01130 RNU6-542P-201ENST00000516405 103 ntBASIC0.24□□□□□ -2.37
LDLRP01130 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
LDLRP01130 U4.4-201ENST00000620626 117 ntBASIC0.24□□□□□ -2.37
LDLRP01130 AC103706.3-201ENST00000636297 85 ntBASIC0.24□□□□□ -2.37
LDLRP01130 MIR630-201ENST00000384957 97 ntBASIC0.23□□□□□ -2.37
LDLRP01130 MIR643-201ENST00000385267 97 ntBASIC0.23□□□□□ -2.37
LDLRP01130 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
LDLRP01130 MIR1255B2-201ENST00000408618 67 ntBASIC0.23□□□□□ -2.37
LDLRP01130 AC110620.1-201ENST00000416042 228 ntBASIC0.23□□□□□ -2.37
LDLRP01130 MIR548V-201ENST00000584165 80 ntBASIC0.23□□□□□ -2.37
LDLRP01130 SNORD115-25-201ENST00000362619 82 ntBASIC0.22□□□□□ -2.37
LDLRP01130 MIR548C-201ENST00000384815 97 ntBASIC0.22□□□□□ -2.37
LDLRP01130 MIRLET7B-201ENST00000385140 83 ntBASIC0.22□□□□□ -2.37
LDLRP01130 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
LDLRP01130 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.22□□□□□ -2.37
LDLRP01130 SNORD2-201ENST00000459163 69 ntBASIC0.22□□□□□ -2.37
LDLRP01130 SCARNA21.1-201ENST00000515996 128 ntBASIC0.22□□□□□ -2.37
LDLRP01130 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
LDLRP01130 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
LDLRP01130 MIR519A2-201ENST00000384990 87 ntBASIC0.21□□□□□ -2.38
LDLRP01130 MIR517B-201ENST00000385102 67 ntBASIC0.21□□□□□ -2.38
LDLRP01130 RNU6-1246P-201ENST00000391064 107 ntBASIC0.21□□□□□ -2.38
LDLRP01130 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
LDLRP01130 MIR548AG1-201ENST00000579932 66 ntBASIC0.21□□□□□ -2.38
LDLRP01130 AL627230.5-201ENST00000619807 58 ntBASIC0.21□□□□□ -2.38
LDLRP01130 RNU6-698P-201ENST00000363523 107 ntBASIC0.2□□□□□ -2.38
LDLRP01130 RNU6-34P-201ENST00000364874 107 ntBASIC0.2□□□□□ -2.38
LDLRP01130 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
LDLRP01130 Y_RNA.325-201ENST00000365171 122 ntBASIC0.19□□□□□ -2.38
LDLRP01130 RNU6-518P-201ENST00000516056 96 ntBASIC0.19□□□□□ -2.38
LDLRP01130 RNU6-180P-201ENST00000516697 61 ntBASIC0.19□□□□□ -2.38
LDLRP01130 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
LDLRP01130 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
LDLRP01130 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
LDLRP01130 SNORA25.5-201ENST00000363782 126 ntBASIC0.18□□□□□ -2.38
LDLRP01130 RNA5SP192-201ENST00000364404 120 ntBASIC0.18□□□□□ -2.38
LDLRP01130 SNORD115-23-201ENST00000364461 82 ntBASIC0.18□□□□□ -2.38
LDLRP01130 RNU6-669P-201ENST00000365575 107 ntBASIC0.18□□□□□ -2.38
LDLRP01130 AP000676.1-201ENST00000533307 52 ntBASIC0.18□□□□□ -2.38
LDLRP01130 MIR6507-201ENST00000613630 70 ntBASIC0.18□□□□□ -2.38
LDLRP01130 Y_RNA.246-201ENST00000364495 108 ntBASIC0.17□□□□□ -2.38
LDLRP01130 SNORD113-2-201ENST00000391082 72 ntBASIC0.17□□□□□ -2.38
LDLRP01130 AL021921.1-201ENST00000442774 93 ntBASIC0.17□□□□□ -2.38
LDLRP01130 CR383656.4-201ENST00000546909 122 ntBASIC0.17□□□□□ -2.38
LDLRP01130 MIR4802-201ENST00000581881 80 ntBASIC0.17□□□□□ -2.38
LDLRP01130 AC104408.1-201ENST00000605241 170 ntBASIC0.17□□□□□ -2.38
LDLRP01130 MIR6514-201ENST00000622549 70 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms