Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR5591-201ENST00000578248 65 ntBASIC-1.71□□□□□ -2.68
NPHP4O75161 MIR6739-201ENST00000622461 75 ntBASIC-1.71□□□□□ -2.68
NPHP4O75161 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.72□□□□□ -2.68
NPHP4O75161 MIR507-201ENST00000385234 94 ntBASIC-1.72□□□□□ -2.68
NPHP4O75161 AL353621.2-201ENST00000605340 133 ntBASIC-1.72□□□□□ -2.68
NPHP4O75161 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.72□□□□□ -2.68
NPHP4O75161 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 MIR29B1-201ENST00000385015 81 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 RNU6-576P-201ENST00000390854 102 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 RNU7-88P-201ENST00000458752 63 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 RNU7-153P-201ENST00000516455 62 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 MIR548AG1-201ENST00000579932 66 ntBASIC-1.73□□□□□ -2.69
NPHP4O75161 AL353691.2-201ENST00000443795 59 ntBASIC-1.74□□□□□ -2.69
NPHP4O75161 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.74□□□□□ -2.69
NPHP4O75161 RNU6-694P-201ENST00000364071 147 ntBASIC-1.74□□□□□ -2.69
NPHP4O75161 RNU6-182P-201ENST00000516970 105 ntBASIC-1.74□□□□□ -2.69
NPHP4O75161 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.74□□□□□ -2.69
NPHP4O75161 RNA5SP26-201ENST00000362406 119 ntBASIC-1.75□□□□□ -2.69
NPHP4O75161 RNU6-886P-201ENST00000384319 105 ntBASIC-1.75□□□□□ -2.69
NPHP4O75161 MIR527-201ENST00000385244 85 ntBASIC-1.75□□□□□ -2.69
NPHP4O75161 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.75□□□□□ -2.69
NPHP4O75161 AP002795.1-201ENST00000534879 84 ntBASIC-1.75□□□□□ -2.69
NPHP4O75161 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 RNU6-80P-201ENST00000384195 107 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 MIR1236-201ENST00000408340 102 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 AL450471.1-201ENST00000447509 127 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 RNU6-904P-201ENST00000516206 101 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 U7.5-201ENST00000517224 61 ntBASIC-1.76□□□□□ -2.69
NPHP4O75161 RNU6-226P-201ENST00000363778 107 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 AL021921.1-201ENST00000442774 93 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 RNU7-61P-201ENST00000515897 61 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 RNU7-200P-201ENST00000516105 62 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 RNU6-346P-201ENST00000516288 111 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.77□□□□□ -2.69
NPHP4O75161 SNORD116-10-201ENST00000363791 102 ntBASIC-1.78□□□□□ -2.69
NPHP4O75161 MIR4770-201ENST00000579149 58 ntBASIC-1.78□□□□□ -2.69
NPHP4O75161 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.79□□□□□ -2.7
NPHP4O75161 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.79□□□□□ -2.7
NPHP4O75161 RNU6-162P-201ENST00000516228 103 ntBASIC-1.79□□□□□ -2.7
NPHP4O75161 MIR6129-201ENST00000616087 109 ntBASIC-1.79□□□□□ -2.7
NPHP4O75161 U6.95-201ENST00000636931 70 ntBASIC-1.79□□□□□ -2.7
NPHP4O75161 SNORD19-201ENST00000391191 68 ntBASIC-1.8□□□□□ -2.7
NPHP4O75161 MIR889-201ENST00000401280 79 ntBASIC-1.8□□□□□ -2.7
NPHP4O75161 RNU6-537P-201ENST00000517277 103 ntBASIC-1.8□□□□□ -2.7
NPHP4O75161 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
NPHP4O75161 RNU6-340P-201ENST00000364005 107 ntBASIC-1.81□□□□□ -2.7
NPHP4O75161 RNU6-246P-201ENST00000384702 107 ntBASIC-1.81□□□□□ -2.7
NPHP4O75161 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RNU6-880P-201ENST00000384526 107 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 MT-TG-201ENST00000387429 68 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RPL35AP4-201ENST00000412007 102 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RNU6-752P-201ENST00000516376 102 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RNU6-659P-201ENST00000516454 104 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RNU6-656P-201ENST00000516785 107 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 MIR5683-201ENST00000636514 76 ntBASIC-1.82□□□□□ -2.7
NPHP4O75161 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 AC091912.2-201ENST00000624798 167 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 MIR590-201ENST00000385008 97 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 AL035461.1-201ENST00000421490 332 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 MIR4490-201ENST00000582647 84 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 MIR6874-201ENST00000635894 71 ntBASIC-1.83□□□□□ -2.7
NPHP4O75161 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 SNORD116-21-201ENST00000384507 92 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 RNU6-412P-201ENST00000516434 106 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 U2.7-201ENST00000619197 100 ntBASIC-1.84□□□□□ -2.7
NPHP4O75161 SNORD115-27-201ENST00000364430 82 ntBASIC-1.85□□□□□ -2.71
NPHP4O75161 AL078595.1-201ENST00000404458 226 ntBASIC-1.85□□□□□ -2.71
NPHP4O75161 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.86□□□□□ -2.71
NPHP4O75161 RNU6-164P-201ENST00000364604 103 ntBASIC-1.86□□□□□ -2.71
NPHP4O75161 RNU6-774P-201ENST00000363238 107 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 RNU6-681P-201ENST00000364012 104 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 MIR548C-201ENST00000384815 97 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 U7.3-201ENST00000616123 62 ntBASIC-1.87□□□□□ -2.71
NPHP4O75161 MIR548Q-201ENST00000408404 100 ntBASIC-1.88□□□□□ -2.71
NPHP4O75161 RNU6-109P-201ENST00000516364 107 ntBASIC-1.88□□□□□ -2.71
NPHP4O75161 RNU6-184P-201ENST00000516514 107 ntBASIC-1.88□□□□□ -2.71
NPHP4O75161 MIR496-201ENST00000385226 102 ntBASIC-1.89□□□□□ -2.71
NPHP4O75161 SNORD77.2-201ENST00000391045 68 ntBASIC-1.89□□□□□ -2.71
NPHP4O75161 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.89□□□□□ -2.71
NPHP4O75161 MIR4520-1-201ENST00000582609 70 ntBASIC-1.89□□□□□ -2.71
NPHP4O75161 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.89□□□□□ -2.71
NPHP4O75161 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.9□□□□□ -2.71
NPHP4O75161 RNU6-907P-201ENST00000390924 102 ntBASIC-1.91□□□□□ -2.71
NPHP4O75161 AC090616.4-201ENST00000448026 115 ntBASIC-1.91□□□□□ -2.71
NPHP4O75161 RNU6-255P-201ENST00000516957 105 ntBASIC-1.91□□□□□ -2.71
NPHP4O75161 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.91□□□□□ -2.72
NPHP4O75161 RNU6-645P-201ENST00000364649 106 ntBASIC-1.91□□□□□ -2.72
NPHP4O75161 MIR1302-5-201ENST00000408164 150 ntBASIC-1.91□□□□□ -2.72
NPHP4O75161 RNU6-807P-201ENST00000516805 107 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms