Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR548L-201ENST00000408303 86 ntBASIC1.04□□□□□ -2.24
GRIN3BO60391 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.04□□□□□ -2.24
GRIN3BO60391 RNA5SP94-201ENST00000516917 108 ntBASIC1.04□□□□□ -2.24
GRIN3BO60391 CYP3A54P-201ENST00000566950 75 ntBASIC1.04□□□□□ -2.24
GRIN3BO60391 AL627230.5-201ENST00000619807 58 ntBASIC1.04□□□□□ -2.24
GRIN3BO60391 RNA5SP222-201ENST00000411039 105 ntBASIC1.03□□□□□ -2.24
GRIN3BO60391 Y_RNA.407-201ENST00000383986 113 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 MIR516B1-201ENST00000385211 90 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 RNU7-119P-201ENST00000459279 63 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 MIR548X-201ENST00000580069 75 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 MIR4473-201ENST00000583731 91 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 SNORA70.25-201ENST00000612741 95 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 AC243829.3-201ENST00000622177 108 ntBASIC1.02□□□□□ -2.25
GRIN3BO60391 RNA5SP347-201ENST00000362445 119 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 Y_RNA.74-201ENST00000362911 99 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 SNORD1B-201ENST00000363091 84 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 MIR508-201ENST00000384857 115 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 MIR519A2-201ENST00000384990 87 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 SNORA49-201ENST00000386157 136 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 RNU6-337P-201ENST00000391243 106 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 SNORD116.2-201ENST00000391251 93 ntBASIC1.01□□□□□ -2.25
GRIN3BO60391 MIR4490-201ENST00000582647 84 ntBASIC1□□□□□ -2.25
GRIN3BO60391 MIR7107-201ENST00000611489 80 ntBASIC1□□□□□ -2.25
GRIN3BO60391 RNU6-810P-201ENST00000364001 107 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 RNU6-110P-201ENST00000384508 104 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 MIR545-201ENST00000385085 106 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 SNORA40B-201ENST00000385573 128 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 HMGN2P22-201ENST00000427588 175 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 RNU6-518P-201ENST00000516056 96 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 RNA5SP227-201ENST00000516184 113 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 RNA5SP268-201ENST00000516828 124 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 MIR4752-201ENST00000579672 72 ntBASIC0.99□□□□□ -2.25
GRIN3BO60391 MIR7110-201ENST00000612638 86 ntBASIC0.98□□□□□ -2.25
GRIN3BO60391 MIR2909-201ENST00000617113 69 ntBASIC0.98□□□□□ -2.25
GRIN3BO60391 RNU6-924P-201ENST00000362926 108 ntBASIC0.97□□□□□ -2.25
GRIN3BO60391 MIR140-201ENST00000385282 100 ntBASIC0.97□□□□□ -2.25
GRIN3BO60391 MIR1255B2-201ENST00000408618 67 ntBASIC0.97□□□□□ -2.25
GRIN3BO60391 AL021921.1-201ENST00000442774 93 ntBASIC0.97□□□□□ -2.25
GRIN3BO60391 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
GRIN3BO60391 Y_RNA.109-201ENST00000363215 102 ntBASIC0.96□□□□□ -2.26
GRIN3BO60391 SNORD110-201ENST00000408189 75 ntBASIC0.96□□□□□ -2.26
GRIN3BO60391 RNA5SP285-201ENST00000516619 119 ntBASIC0.96□□□□□ -2.26
GRIN3BO60391 RNU6-838P-201ENST00000363399 108 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 SNORA36.2-201ENST00000384004 127 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 RNU6-172P-201ENST00000411000 93 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 AC006210.1-201ENST00000424882 111 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 U6.96-201ENST00000636425 70 ntBASIC0.95□□□□□ -2.26
GRIN3BO60391 MIR6866-201ENST00000638146 69 ntBASIC0.94□□□□□ -2.26
GRIN3BO60391 RNU6-986P-201ENST00000363133 102 ntBASIC0.93□□□□□ -2.26
GRIN3BO60391 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
GRIN3BO60391 MIR527-201ENST00000385244 85 ntBASIC0.93□□□□□ -2.26
GRIN3BO60391 AC243829.6-201ENST00000612652 106 ntBASIC0.93□□□□□ -2.26
GRIN3BO60391 RNU6-246P-201ENST00000384702 107 ntBASIC0.92□□□□□ -2.26
GRIN3BO60391 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
GRIN3BO60391 RNU6-419P-201ENST00000517030 63 ntBASIC0.92□□□□□ -2.26
GRIN3BO60391 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.91□□□□□ -2.26
GRIN3BO60391 RNA5SP517-201ENST00000364724 117 ntBASIC0.91□□□□□ -2.26
GRIN3BO60391 VTRNA1-3-201ENST00000365645 89 ntBASIC0.91□□□□□ -2.26
GRIN3BO60391 RNU6-1250P-201ENST00000391218 107 ntBASIC0.91□□□□□ -2.26
GRIN3BO60391 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
GRIN3BO60391 MIR6773-201ENST00000612812 74 ntBASIC0.91□□□□□ -2.26
GRIN3BO60391 SNORD115-25-201ENST00000362619 82 ntBASIC0.9□□□□□ -2.27
GRIN3BO60391 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
GRIN3BO60391 RNU6-1232P-201ENST00000516299 86 ntBASIC0.9□□□□□ -2.27
GRIN3BO60391 RNU6-175P-201ENST00000516896 107 ntBASIC0.9□□□□□ -2.27
GRIN3BO60391 RNU6-598P-201ENST00000364017 105 ntBASIC0.89□□□□□ -2.27
GRIN3BO60391 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
GRIN3BO60391 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
GRIN3BO60391 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 RNU6-458P-201ENST00000384179 107 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 MIRLET7B-201ENST00000385140 83 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 AC244090.1-201ENST00000441884 93 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 RNU7-154P-201ENST00000516194 62 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 U6.58-201ENST00000613107 107 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 U2.18-201ENST00000622185 84 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 MIR5087-201ENST00000635826 76 ntBASIC0.88□□□□□ -2.27
GRIN3BO60391 SNORD118-201ENST00000363593 134 ntBASIC0.87□□□□□ -2.27
GRIN3BO60391 MIR579-201ENST00000385221 98 ntBASIC0.87□□□□□ -2.27
GRIN3BO60391 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.87□□□□□ -2.27
GRIN3BO60391 SNORA40.8-201ENST00000411034 126 ntBASIC0.87□□□□□ -2.27
GRIN3BO60391 AC069271.1-201ENST00000445577 156 ntBASIC0.87□□□□□ -2.27
GRIN3BO60391 MIR20A-201ENST00000362279 71 ntBASIC0.85□□□□□ -2.27
GRIN3BO60391 RNU6-502P-201ENST00000362419 108 ntBASIC0.85□□□□□ -2.27
GRIN3BO60391 Y_RNA.69-201ENST00000362885 109 ntBASIC0.85□□□□□ -2.27
GRIN3BO60391 Y_RNA.698-201ENST00000516798 118 ntBASIC0.85□□□□□ -2.27
GRIN3BO60391 RNU7-188P-201ENST00000517063 64 ntBASIC0.85□□□□□ -2.27
GRIN3BO60391 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
GRIN3BO60391 SNORD71-201ENST00000411292 86 ntBASIC0.84□□□□□ -2.27
GRIN3BO60391 SNORA62.5-201ENST00000516634 120 ntBASIC0.84□□□□□ -2.27
GRIN3BO60391 RNU7-151P-201ENST00000516930 53 ntBASIC0.84□□□□□ -2.27
GRIN3BO60391 MIR518A1-201ENST00000385068 85 ntBASIC0.83□□□□□ -2.28
GRIN3BO60391 MIR125B1-201ENST00000385236 88 ntBASIC0.83□□□□□ -2.28
GRIN3BO60391 MIR5706-201ENST00000579841 80 ntBASIC0.83□□□□□ -2.28
GRIN3BO60391 RNU6-247P-201ENST00000362636 107 ntBASIC0.82□□□□□ -2.28
GRIN3BO60391 RNU6-1206P-201ENST00000516339 103 ntBASIC0.82□□□□□ -2.28
GRIN3BO60391 SNORA25.18-201ENST00000607153 114 ntBASIC0.82□□□□□ -2.28
GRIN3BO60391 MIR6755-201ENST00000619993 66 ntBASIC0.82□□□□□ -2.28
GRIN3BO60391 SNORD115-23-201ENST00000364461 82 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms