Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 SNORD114-15-201ENST00000364687 72 ntBASIC0.07□□□□□ -2.4
CBX4O00257 RNU6-180P-201ENST00000516697 61 ntBASIC0.07□□□□□ -2.4
CBX4O00257 SNORA49-201ENST00000386157 136 ntBASIC0.06□□□□□ -2.4
CBX4O00257 SNORD78.1-201ENST00000390866 65 ntBASIC0.06□□□□□ -2.4
CBX4O00257 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
CBX4O00257 RNA5SP331-201ENST00000364986 107 ntBASIC0.05□□□□□ -2.4
CBX4O00257 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
CBX4O00257 RNA5SP147-201ENST00000516493 109 ntBASIC0.05□□□□□ -2.4
CBX4O00257 MIR4493-201ENST00000584016 73 ntBASIC0.05□□□□□ -2.4
CBX4O00257 RNU6-228P-201ENST00000362700 106 ntBASIC0.04□□□□□ -2.4
CBX4O00257 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
CBX4O00257 AP001180.6-201ENST00000584918 159 ntBASIC0.04□□□□□ -2.4
CBX4O00257 MIR604-201ENST00000384880 94 ntBASIC0.03□□□□□ -2.4
CBX4O00257 MIR1255A-201ENST00000408338 113 ntBASIC0.03□□□□□ -2.4
CBX4O00257 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
CBX4O00257 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.03□□□□□ -2.4
CBX4O00257 RNU6-330P-201ENST00000363015 107 ntBASIC0.02□□□□□ -2.41
CBX4O00257 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
CBX4O00257 SNORA15B-2-201ENST00000384058 135 ntBASIC0.02□□□□□ -2.41
CBX4O00257 SNORA15B-1-201ENST00000384334 135 ntBASIC0.02□□□□□ -2.41
CBX4O00257 snoU13.13-201ENST00000458842 104 ntBASIC0.02□□□□□ -2.41
CBX4O00257 RNA5SP67-201ENST00000516422 131 ntBASIC0.02□□□□□ -2.41
CBX4O00257 AC145423.2-201ENST00000610631 239 ntBASIC0.02□□□□□ -2.41
CBX4O00257 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
CBX4O00257 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CBX4O00257 SNORD115-25-201ENST00000362619 82 ntBASIC0□□□□□ -2.41
CBX4O00257 AC104692.1-201ENST00000472406 90 ntBASIC0□□□□□ -2.41
CBX4O00257 AC108676.2-201ENST00000605225 163 ntBASIC0□□□□□ -2.41
CBX4O00257 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 AP000676.1-201ENST00000533307 52 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 MIR6507-201ENST00000613630 70 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 U6.96-201ENST00000636425 70 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.02□□□□□ -2.41
CBX4O00257 RNU6-279P-201ENST00000391297 101 ntBASIC-0.03□□□□□ -2.41
CBX4O00257 SCARNA18B-201ENST00000458806 135 ntBASIC-0.03□□□□□ -2.41
CBX4O00257 MIR409-201ENST00000362237 79 ntBASIC-0.04□□□□□ -2.42
CBX4O00257 RNU6-46P-201ENST00000383860 107 ntBASIC-0.04□□□□□ -2.42
CBX4O00257 RNU6-24P-201ENST00000384440 107 ntBASIC-0.04□□□□□ -2.42
CBX4O00257 AC244250.2-201ENST00000418731 148 ntBASIC-0.04□□□□□ -2.42
CBX4O00257 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.04□□□□□ -2.42
CBX4O00257 SNORD45.1-201ENST00000363181 77 ntBASIC-0.05□□□□□ -2.42
CBX4O00257 RNU6-857P-201ENST00000515893 110 ntBASIC-0.05□□□□□ -2.42
CBX4O00257 RNU6-502P-201ENST00000362419 108 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 SNORD95.1-201ENST00000364099 68 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 SNORA33.1-201ENST00000364957 130 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR214-201ENST00000385214 110 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
CBX4O00257 RNU6-337P-201ENST00000391243 106 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR4645-201ENST00000583158 77 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR6773-201ENST00000612812 74 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 U7.4-201ENST00000614961 63 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR6739-201ENST00000622461 75 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 AC090617.8-201ENST00000623339 167 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR664A-201ENST00000626086 82 ntBASIC-0.06□□□□□ -2.42
CBX4O00257 MIR655-201ENST00000362159 97 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 MIR101-1-201ENST00000362265 75 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 MIR521-2-201ENST00000384818 87 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 RNU6-604P-201ENST00000390917 100 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 RNU6-70P-201ENST00000516438 60 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 MIR8053-201ENST00000613344 75 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
CBX4O00257 RNU6-455P-201ENST00000384681 107 ntBASIC-0.08□□□□□ -2.42
CBX4O00257 MIR9-2-201ENST00000384838 87 ntBASIC-0.08□□□□□ -2.42
CBX4O00257 RNA5SP266-201ENST00000410273 108 ntBASIC-0.08□□□□□ -2.42
CBX4O00257 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.08□□□□□ -2.42
CBX4O00257 RNA5SP225-201ENST00000410874 135 ntBASIC-0.08□□□□□ -2.42
CBX4O00257 MIRLET7B-201ENST00000385140 83 ntBASIC-0.09□□□□□ -2.42
CBX4O00257 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
CBX4O00257 MIR3134-201ENST00000579433 74 ntBASIC-0.1□□□□□ -2.43
CBX4O00257 RNU6-645P-201ENST00000364649 106 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 RNU6-900P-201ENST00000384498 102 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 RPS29P8-201ENST00000445109 171 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 RNU7-55P-201ENST00000459426 62 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 RNU6-982P-201ENST00000516216 102 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 RNU6-656P-201ENST00000516785 107 ntBASIC-0.11□□□□□ -2.43
CBX4O00257 SNORD114-28-201ENST00000363610 72 ntBASIC-0.12□□□□□ -2.43
CBX4O00257 SNORD115-22-201ENST00000364456 82 ntBASIC-0.12□□□□□ -2.43
CBX4O00257 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.12□□□□□ -2.43
CBX4O00257 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.12□□□□□ -2.43
CBX4O00257 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
CBX4O00257 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.13□□□□□ -2.43
CBX4O00257 MIR154-201ENST00000385243 84 ntBASIC-0.13□□□□□ -2.43
CBX4O00257 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 SNORD115-23-201ENST00000364461 82 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 SNORD114-12-201ENST00000365400 75 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 SNORD45A-201ENST00000384512 84 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 SNORD56B-201ENST00000384713 71 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 RNA5SP451-201ENST00000410588 110 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 RNU6-881P-201ENST00000516813 102 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 CYP3A54P-201ENST00000566950 75 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 uc_338.36-201ENST00000622331 158 ntBASIC-0.14□□□□□ -2.43
CBX4O00257 RNU6-973P-201ENST00000364690 107 ntBASIC-0.15□□□□□ -2.43
CBX4O00257 RNU6-411P-201ENST00000384451 107 ntBASIC-0.15□□□□□ -2.43
CBX4O00257 MIR224-201ENST00000384889 81 ntBASIC-0.15□□□□□ -2.43
CBX4O00257 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.15□□□□□ -2.43
CBX4O00257 RNU6-587P-201ENST00000391282 106 ntBASIC-0.15□□□□□ -2.43
CBX4O00257 SNORD57-201ENST00000448188 72 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms