Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-279P-201ENST00000391297 101 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 MIR8053-201ENST00000613344 75 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 RNU6-315P-201ENST00000362666 107 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 SNORA2.1-201ENST00000363089 137 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 SNORA63.6-201ENST00000364921 119 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 RNU7-154P-201ENST00000516194 62 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 MIR4493-201ENST00000584016 73 ntBASIC-0.21□□□□□ -2.44
SMCHD1A6NHR9 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.22□□□□□ -2.44
SMCHD1A6NHR9 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 RNU6-70P-201ENST00000516438 60 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 MIR1245B-201ENST00000636115 69 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 RNU6-228P-201ENST00000362700 106 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 SNORA8.1-201ENST00000384250 140 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 MIR9-2-201ENST00000384838 87 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 AC074348.1-201ENST00000426503 132 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 MIR4432-201ENST00000581823 84 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 AL391099.1-201ENST00000624635 187 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 MIR3202-2-201ENST00000635980 79 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 MIR371B-201ENST00000638082 66 ntBASIC-0.23□□□□□ -2.45
SMCHD1A6NHR9 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
SMCHD1A6NHR9 MIR582-201ENST00000365731 98 ntBASIC-0.24□□□□□ -2.45
SMCHD1A6NHR9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.24□□□□□ -2.45
SMCHD1A6NHR9 AC090617.8-201ENST00000623339 167 ntBASIC-0.24□□□□□ -2.45
SMCHD1A6NHR9 RNU6-990P-201ENST00000364385 104 ntBASIC-0.25□□□□□ -2.45
SMCHD1A6NHR9 SNORA33.1-201ENST00000364957 130 ntBASIC-0.25□□□□□ -2.45
SMCHD1A6NHR9 AC021146.9-201ENST00000512503 156 ntBASIC-0.25□□□□□ -2.45
SMCHD1A6NHR9 U6.81-201ENST00000612550 106 ntBASIC-0.25□□□□□ -2.45
SMCHD1A6NHR9 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.25□□□□□ -2.45
SMCHD1A6NHR9 MIR494-201ENST00000349529 81 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 Z95118.1-201ENST00000421372 247 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 MIR148A-201ENST00000362215 68 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 RNY4P29-201ENST00000410801 97 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 RNU6-656P-201ENST00000516785 107 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 IGLL4P-201ENST00000614590 133 ntBASIC-0.26□□□□□ -2.45
SMCHD1A6NHR9 SNORD115-23-201ENST00000364461 82 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 MIR1255B2-201ENST00000408618 67 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 RNU6-402P-201ENST00000410678 103 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 MIR4679-1-201ENST00000637619 75 ntBASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
SMCHD1A6NHR9 RNU6-900P-201ENST00000384498 102 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 snoR1.1-201ENST00000628177 80 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 SNORD113.1-201ENST00000363280 73 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 MIR519A2-201ENST00000384990 87 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 SNORD90-201ENST00000391145 111 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 MIR4280-201ENST00000582178 76 ntBASIC-0.28□□□□□ -2.45
SMCHD1A6NHR9 MIR6507-201ENST00000613630 70 ntBASIC-0.29□□□□□ -2.46
SMCHD1A6NHR9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.3□□□□□ -2.46
SMCHD1A6NHR9 MIR664A-201ENST00000626086 82 ntBASIC-0.3□□□□□ -2.46
SMCHD1A6NHR9 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.31□□□□□ -2.46
SMCHD1A6NHR9 AC114755.3-201ENST00000481111 251 ntBASIC-0.31□□□□□ -2.46
SMCHD1A6NHR9 MIR655-201ENST00000362159 97 ntBASIC-0.31□□□□□ -2.46
SMCHD1A6NHR9 MIR6851-201ENST00000617060 67 ntBASIC-0.31□□□□□ -2.46
SMCHD1A6NHR9 AC093726.3-201ENST00000637588 150 ntBASIC-0.31□□□□□ -2.46
SMCHD1A6NHR9 RNU6-686P-201ENST00000364839 107 ntBASIC-0.32□□□□□ -2.46
SMCHD1A6NHR9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.32□□□□□ -2.46
SMCHD1A6NHR9 AC145423.2-201ENST00000610631 239 ntBASIC-0.32□□□□□ -2.46
SMCHD1A6NHR9 MIR8068-201ENST00000618032 68 ntBASIC-0.32□□□□□ -2.46
SMCHD1A6NHR9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 MTND4LP1-201ENST00000446263 157 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 AL590491.3-201ENST00000610731 82 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 SNORD114-31-201ENST00000363219 75 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 SNORD73B-201ENST00000364394 72 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 RNU6-982P-201ENST00000516216 102 ntBASIC-0.33□□□□□ -2.46
SMCHD1A6NHR9 RNU6-129P-201ENST00000391022 107 ntBASIC-0.34□□□□□ -2.46
SMCHD1A6NHR9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.34□□□□□ -2.46
SMCHD1A6NHR9 AC108676.2-201ENST00000605225 163 ntBASIC-0.34□□□□□ -2.46
SMCHD1A6NHR9 U4.4-201ENST00000620626 117 ntBASIC-0.34□□□□□ -2.46
SMCHD1A6NHR9 uc_338.36-201ENST00000622331 158 ntBASIC-0.34□□□□□ -2.46
SMCHD1A6NHR9 MIR101-1-201ENST00000362265 75 ntBASIC-0.35□□□□□ -2.46
SMCHD1A6NHR9 SNORD57-201ENST00000448188 72 ntBASIC-0.35□□□□□ -2.46
SMCHD1A6NHR9 MIR4712-201ENST00000583750 82 ntBASIC-0.35□□□□□ -2.46
SMCHD1A6NHR9 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.46
SMCHD1A6NHR9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.35□□□□□ -2.47
SMCHD1A6NHR9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
SMCHD1A6NHR9 RNU6-587P-201ENST00000391282 106 ntBASIC-0.35□□□□□ -2.47
SMCHD1A6NHR9 RNU6-807P-201ENST00000516805 107 ntBASIC-0.35□□□□□ -2.47
SMCHD1A6NHR9 AL627230.5-201ENST00000619807 58 ntBASIC-0.35□□□□□ -2.47
SMCHD1A6NHR9 RNA5SP215-201ENST00000363440 122 ntBASIC-0.36□□□□□ -2.47
SMCHD1A6NHR9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.36□□□□□ -2.47
SMCHD1A6NHR9 SNORA13-201ENST00000458790 133 ntBASIC-0.36□□□□□ -2.47
SMCHD1A6NHR9 RNU7-174P-201ENST00000516248 59 ntBASIC-0.36□□□□□ -2.47
SMCHD1A6NHR9 RNU6-542P-201ENST00000516405 103 ntBASIC-0.36□□□□□ -2.47
SMCHD1A6NHR9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.37□□□□□ -2.47
SMCHD1A6NHR9 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.37□□□□□ -2.47
SMCHD1A6NHR9 RNU6-380P-201ENST00000410207 107 ntBASIC-0.37□□□□□ -2.47
SMCHD1A6NHR9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.37□□□□□ -2.47
SMCHD1A6NHR9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.38□□□□□ -2.47
SMCHD1A6NHR9 RNU6-881P-201ENST00000516813 102 ntBASIC-0.38□□□□□ -2.47
SMCHD1A6NHR9 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
SMCHD1A6NHR9 RPS29P8-201ENST00000445109 171 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms