Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-915P-201ENST00000364943 103 ntBASIC-2.89□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU7-197P-201ENST00000458836 62 ntBASIC-2.89□□□□□ -2.87
TRAV1-2A0A0B4J238 RNY4P9-201ENST00000363194 97 ntBASIC-2.9□□□□□ -2.87
TRAV1-2A0A0B4J238 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.9□□□□□ -2.87
TRAV1-2A0A0B4J238 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.9□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.91□□□□□ -2.88
TRAV1-2A0A0B4J238 SNORD58A-201ENST00000383875 65 ntBASIC-2.91□□□□□ -2.88
TRAV1-2A0A0B4J238 RNU6-876P-201ENST00000391295 104 ntBASIC-2.91□□□□□ -2.88
TRAV1-2A0A0B4J238 AC139792.2-201ENST00000624218 587 ntBASIC-2.91□□□□□ -2.88
TRAV1-2A0A0B4J238 SNORD18C-201ENST00000362704 69 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.92□□□□□ -2.88
TRAV1-2A0A0B4J238 SNORD116-4-201ENST00000384733 96 ntBASIC-2.93□□□□□ -2.88
TRAV1-2A0A0B4J238 RNU6-460P-201ENST00000391158 108 ntBASIC-2.93□□□□□ -2.88
TRAV1-2A0A0B4J238 MIR1236-201ENST00000408340 102 ntBASIC-2.93□□□□□ -2.88
TRAV1-2A0A0B4J238 AL158147.1-201ENST00000443970 75 ntBASIC-2.93□□□□□ -2.88
TRAV1-2A0A0B4J238 MIR4679-2-201ENST00000578358 77 ntBASIC-2.93□□□□□ -2.88
TRAV1-2A0A0B4J238 RNU6-639P-201ENST00000384074 107 ntBASIC-2.94□□□□□ -2.88
TRAV1-2A0A0B4J238 MIR4760-201ENST00000585040 80 ntBASIC-2.94□□□□□ -2.88
TRAV1-2A0A0B4J238 AC025166.1-201ENST00000612411 163 ntBASIC-2.94□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.95□□□□□ -2.88
TRAV1-2A0A0B4J238 MIR548V-201ENST00000584165 80 ntBASIC-2.95□□□□□ -2.88
TRAV1-2A0A0B4J238 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.95□□□□□ -2.88
TRAV1-2A0A0B4J238 AL035470.1-201ENST00000622571 220 ntBASIC-2.95□□□□□ -2.88
TRAV1-2A0A0B4J238 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.95□□□□□ -2.88
TRAV1-2A0A0B4J238 SNORD116-16-201ENST00000384533 92 ntBASIC-2.96□□□□□ -2.88
TRAV1-2A0A0B4J238 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.96□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 RNY3P8-201ENST00000411366 126 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 AC012531.4-201ENST00000616509 177 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.97□□□□□ -2.88
TRAV1-2A0A0B4J238 SNORD42.2-201ENST00000365570 69 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-669P-201ENST00000365575 107 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-995P-201ENST00000391244 107 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-803P-201ENST00000516034 102 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-795P-201ENST00000516323 103 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU7-153P-201ENST00000516455 62 ntBASIC-2.98□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD77.2-201ENST00000391045 68 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD113-2-201ENST00000391082 72 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-972P-201ENST00000391208 107 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-141P-201ENST00000410499 105 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD63.2-201ENST00000516303 64 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-988P-201ENST00000519081 107 ntBASIC-2.99□□□□□ -2.89
TRAV1-2A0A0B4J238 MIR369-201ENST00000362155 70 ntBASIC-3□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.705-201ENST00000516862 110 ntBASIC-3□□□□□ -2.89
TRAV1-2A0A0B4J238 SNX3P1Y-201ENST00000615757 176 ntBASIC-3□□□□□ -2.89
TRAV1-2A0A0B4J238 AP001340.1-201ENST00000624405 217 ntBASIC-3□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD1B-201ENST00000363091 84 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 MIR581-201ENST00000384895 96 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD58.1-201ENST00000391313 66 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 MTND2P23-201ENST00000422990 651 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU7-151P-201ENST00000516930 53 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 MIR5009-201ENST00000578736 100 ntBASIC-3.01□□□□□ -2.89
TRAV1-2A0A0B4J238 RNY1P1-201ENST00000364372 112 ntBASIC-3.02□□□□□ -2.89
TRAV1-2A0A0B4J238 RNY3P1-201ENST00000365085 102 ntBASIC-3.02□□□□□ -2.89
TRAV1-2A0A0B4J238 SNORD58C-201ENST00000365223 64 ntBASIC-3.02□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU4-11P-201ENST00000365287 132 ntBASIC-3.02□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-523P-201ENST00000516304 54 ntBASIC-3.02□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.03□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.03□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-887P-201ENST00000410660 100 ntBASIC-3.03□□□□□ -2.89
TRAV1-2A0A0B4J238 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.03□□□□□ -2.89
TRAV1-2A0A0B4J238 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.03□□□□□ -2.89
TRAV1-2A0A0B4J238 RNU6-694P-201ENST00000364071 147 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 RNU6-713P-201ENST00000384761 107 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 RNU6-982P-201ENST00000516216 102 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 RNU6-537P-201ENST00000517277 103 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR7978-201ENST00000636158 59 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 U6.104-201ENST00000637979 90 ntBASIC-3.04□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.05□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR630-201ENST00000384957 97 ntBASIC-3.05□□□□□ -2.9
TRAV1-2A0A0B4J238 SNORA81.3-201ENST00000517283 198 ntBASIC-3.05□□□□□ -2.9
TRAV1-2A0A0B4J238 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.05□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.06□□□□□ -2.9
TRAV1-2A0A0B4J238 SNORA41B-201ENST00000384785 128 ntBASIC-3.06□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR4680-201ENST00000580906 66 ntBASIC-3.06□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR3675-201ENST00000583661 73 ntBASIC-3.06□□□□□ -2.9
TRAV1-2A0A0B4J238 SNORD116-10-201ENST00000363791 102 ntBASIC-3.07□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.07□□□□□ -2.9
TRAV1-2A0A0B4J238 MIR125B1-201ENST00000385236 88 ntBASIC-3.07□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.07□□□□□ -2.9
TRAV1-2A0A0B4J238 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.07□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms