Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm13534-201ENSMUST00000121169 513 ntBASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.11□□□□□ -0.15
Pfdn1Q9CWM4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn1Q9CWM4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn1Q9CWM4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn1Q9CWM4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn1Q9CWM4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Gm40848-201ENSMUST00000221998 324 ntBASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms