Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf111Q99ML9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rnf111Q99ML9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf111Q99ML9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf111Q99ML9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf111Q99ML9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf111Q99ML9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Gm44450-201ENSMUST00000199528 114 ntBASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rnf111Q99ML9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rnf111Q99ML9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rnf111Q99ML9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms