Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp1Q8BJQ2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Gm11779-201ENSMUST00000118541 368 ntBASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp1Q8BJQ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Gm5264-201ENSMUST00000190584 848 ntBASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Gm15590-201ENSMUST00000078419 552 ntBASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp1Q8BJQ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Gm11594-201ENSMUST00000122313 162 ntBASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp1Q8BJQ2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp1Q8BJQ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms