Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.55■□□□□ 0.24
Cspg5Q71M36 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.54■□□□□ 0.24
Cspg5Q71M36 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cspg5Q71M36 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.54■□□□□ 0.24
Cspg5Q71M36 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg5Q71M36 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cspg5Q71M36 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Gm11779-201ENSMUST00000118541 368 ntBASIC16.53■□□□□ 0.24
Cspg5Q71M36 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Gm7506-201ENSMUST00000207758 815 ntBASIC16.53■□□□□ 0.24
Cspg5Q71M36 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg5Q71M36 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.52■□□□□ 0.24
Cspg5Q71M36 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.52■□□□□ 0.24
Cspg5Q71M36 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg5Q71M36 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cspg5Q71M36 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg5Q71M36 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cspg5Q71M36 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg5Q71M36 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.51■□□□□ 0.23
Cspg5Q71M36 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg5Q71M36 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms