Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Gm24589-201ENSMUST00000116692 94 ntBASIC15.22■□□□□ 0.03
CishQ62225 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.22■□□□□ 0.03
CishQ62225 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.22■□□□□ 0.03
CishQ62225 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.22■□□□□ 0.03
CishQ62225 Gm9172-201ENSMUST00000212092 954 ntBASIC15.22■□□□□ 0.03
CishQ62225 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CishQ62225 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CishQ62225 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CishQ62225 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CishQ62225 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CishQ62225 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
CishQ62225 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.21■□□□□ 0.03
CishQ62225 Gm43347-201ENSMUST00000200226 580 ntBASIC15.21■□□□□ 0.03
CishQ62225 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.21■□□□□ 0.03
CishQ62225 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.21■□□□□ 0.03
CishQ62225 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CishQ62225 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.21■□□□□ 0.02
CishQ62225 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CishQ62225 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CishQ62225 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CishQ62225 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CishQ62225 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.2■□□□□ 0.02
CishQ62225 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.2■□□□□ 0.02
CishQ62225 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CishQ62225 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.2■□□□□ 0.02
CishQ62225 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.2■□□□□ 0.02
CishQ62225 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.2■□□□□ 0.02
CishQ62225 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.2■□□□□ 0.02
CishQ62225 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.2■□□□□ 0.02
CishQ62225 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CishQ62225 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CishQ62225 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CishQ62225 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.19■□□□□ 0.02
CishQ62225 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.19■□□□□ 0.02
CishQ62225 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.19■□□□□ 0.02
CishQ62225 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Gm27459-201ENSMUST00000184860 107 ntBASIC15.19■□□□□ 0.02
CishQ62225 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.19■□□□□ 0.02
CishQ62225 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CishQ62225 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CishQ62225 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CishQ62225 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms