Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp48Q3V0C5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Usp48Q3V0C5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp48Q3V0C5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp48Q3V0C5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Gm10175-201ENSMUST00000086013 645 ntBASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp48Q3V0C5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms