Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL591684.3-201ENST00000605187 298 ntBASIC33.14■■■□□ 2.9
HMGXB3Q12766 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC33.14■■■□□ 2.9
HMGXB3Q12766 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC33.14■■■□□ 2.9
HMGXB3Q12766 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
HMGXB3Q12766 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
HMGXB3Q12766 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
HMGXB3Q12766 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.89
HMGXB3Q12766 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 HIST2H3DP1-201ENST00000401004 416 ntBASIC33.13■■■□□ 2.89
HMGXB3Q12766 LBH-204ENST00000406087 559 ntTSL 4 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 AL139424.1-201ENST00000607572 797 ntBASIC33.13■■■□□ 2.89
HMGXB3Q12766 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 AL512408.1-201ENST00000569378 2000 ntBASIC33.13■■■□□ 2.89
HMGXB3Q12766 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
HMGXB3Q12766 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC33.13■■■□□ 2.89
HMGXB3Q12766 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
HMGXB3Q12766 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 LINC02084-201ENST00000606069 1096 ntBASIC33.12■■■□□ 2.89
HMGXB3Q12766 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
HMGXB3Q12766 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
HMGXB3Q12766 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC33.12■■■□□ 2.89
HMGXB3Q12766 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
HMGXB3Q12766 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HMGXB3Q12766 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
HMGXB3Q12766 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC33.11■■■□□ 2.89
HMGXB3Q12766 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
HMGXB3Q12766 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
HMGXB3Q12766 MIR564-202ENST00000385049 94 ntBASIC33.11■■■□□ 2.89
HMGXB3Q12766 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC33.11■■■□□ 2.89
HMGXB3Q12766 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC33.11■■■□□ 2.89
HMGXB3Q12766 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC33.11■■■□□ 2.89
HMGXB3Q12766 AC034236.2-201ENST00000606662 1610 ntBASIC33.11■■■□□ 2.89
HMGXB3Q12766 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
HMGXB3Q12766 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 MED15P5-201ENST00000423150 992 ntBASIC33.1■■■□□ 2.89
HMGXB3Q12766 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 MIR5100-201ENST00000579544 119 ntBASIC33.1■■■□□ 2.89
HMGXB3Q12766 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
HMGXB3Q12766 KATNBL1P6-202ENST00000562413 1466 ntBASIC33.1■■■□□ 2.89
HMGXB3Q12766 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
HMGXB3Q12766 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
HMGXB3Q12766 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC33.09■■■□□ 2.89
HMGXB3Q12766 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC33.09■■■□□ 2.89
HMGXB3Q12766 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC33.09■■■□□ 2.89
HMGXB3Q12766 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 AC011840.4-201ENST00000578471 627 ntBASIC33.09■■■□□ 2.89
HMGXB3Q12766 AP001269.4-201ENST00000609611 512 ntBASIC33.09■■■□□ 2.89
HMGXB3Q12766 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
HMGXB3Q12766 AC116407.3-201ENST00000623905 1129 ntBASIC33.09■■■□□ 2.89
HMGXB3Q12766 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC33.09■■■□□ 2.89
HMGXB3Q12766 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
HMGXB3Q12766 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC33.08■■■□□ 2.89
HMGXB3Q12766 AL591424.1-201ENST00000442569 1213 ntBASIC33.08■■■□□ 2.89
HMGXB3Q12766 AC027796.2-201ENST00000575326 344 ntBASIC33.08■■■□□ 2.89
HMGXB3Q12766 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
HMGXB3Q12766 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC33.08■■■□□ 2.89
HMGXB3Q12766 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
HMGXB3Q12766 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
HMGXB3Q12766 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
HMGXB3Q12766 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
HMGXB3Q12766 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
HMGXB3Q12766 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC33.07■■■□□ 2.89
HMGXB3Q12766 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC33.07■■■□□ 2.89
HMGXB3Q12766 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC33.07■■■□□ 2.89
HMGXB3Q12766 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.89
HMGXB3Q12766 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HMGXB3Q12766 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HMGXB3Q12766 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC33.07■■■□□ 2.88
HMGXB3Q12766 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC33.07■■■□□ 2.88
HMGXB3Q12766 GZMM-202ENST00000592501 941 ntTSL 3 BASIC33.07■■■□□ 2.88
HMGXB3Q12766 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HMGXB3Q12766 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HMGXB3Q12766 AC012676.1-201ENST00000574705 1949 ntBASIC33.06■■■□□ 2.88
HMGXB3Q12766 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC33.06■■■□□ 2.88
HMGXB3Q12766 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
HMGXB3Q12766 CYP51A1P1-201ENST00000492267 1507 ntBASIC33.06■■■□□ 2.88
HMGXB3Q12766 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms