Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gfra1P97785 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gfra1P97785 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra1P97785 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gfra1P97785 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gfra1P97785 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Gfra1P97785 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.17□□□□□ -0.3
Gfra1P97785 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.17□□□□□ -0.3
Gfra1P97785 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.17□□□□□ -0.3
Gfra1P97785 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gfra1P97785 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra1P97785 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gfra1P97785 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.16□□□□□ -0.3
Gfra1P97785 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gfra1P97785 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.16□□□□□ -0.3
Gfra1P97785 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Gm9172-201ENSMUST00000212092 954 ntBASIC13.16□□□□□ -0.3
Gfra1P97785 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gfra1P97785 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Gfra1P97785 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gfra1P97785 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gfra1P97785 Gm11452-201ENSMUST00000122376 690 ntBASIC13.15□□□□□ -0.3
Gfra1P97785 Gm12497-201ENSMUST00000138778 237 ntBASIC13.15□□□□□ -0.3
Gfra1P97785 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.15□□□□□ -0.3
Gfra1P97785 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.15□□□□□ -0.3
Gfra1P97785 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.15□□□□□ -0.3
Gfra1P97785 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.15□□□□□ -0.3
Gfra1P97785 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.15□□□□□ -0.3
Gfra1P97785 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms