Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A1P12107 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A1P12107 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
COL11A1P12107 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
COL11A1P12107 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A1P12107 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
COL11A1P12107 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.41■■□□□ 1.02
COL11A1P12107 AC079781.3-201ENST00000449110 356 ntBASIC21.41■■□□□ 1.02
COL11A1P12107 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.41■■□□□ 1.02
COL11A1P12107 AC074051.2-201ENST00000565115 352 ntBASIC21.41■■□□□ 1.02
COL11A1P12107 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.41■■□□□ 1.02
COL11A1P12107 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A1P12107 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.41■■□□□ 1.02
COL11A1P12107 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL11A1P12107 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 Z98044.1-201ENST00000632503 1764 ntBASIC21.41■■□□□ 1.02
COL11A1P12107 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
COL11A1P12107 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A1P12107 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL11A1P12107 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A1P12107 KRT8P7-201ENST00000533003 1432 ntBASIC21.4■■□□□ 1.02
COL11A1P12107 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.4■■□□□ 1.02
COL11A1P12107 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.4■■□□□ 1.02
COL11A1P12107 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A1P12107 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A1P12107 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.4■■□□□ 1.02
COL11A1P12107 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.4■■□□□ 1.02
COL11A1P12107 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A1P12107 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL11A1P12107 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
COL11A1P12107 AFG3L1P-217ENST00000557444 2447 ntBASIC21.39■■□□□ 1.02
COL11A1P12107 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL11A1P12107 TSSC2-201ENST00000450217 709 ntBASIC21.39■■□□□ 1.02
COL11A1P12107 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.39■■□□□ 1.02
COL11A1P12107 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL11A1P12107 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.39■■□□□ 1.02
COL11A1P12107 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.39■■□□□ 1.02
COL11A1P12107 AC068587.9-201ENST00000641814 219 ntBASIC21.39■■□□□ 1.02
COL11A1P12107 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.39■■□□□ 1.02
COL11A1P12107 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A1P12107 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
COL11A1P12107 KRT8P32-201ENST00000512863 1461 ntBASIC21.39■■□□□ 1.01
COL11A1P12107 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
COL11A1P12107 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
COL11A1P12107 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.39■■□□□ 1.01
COL11A1P12107 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL11A1P12107 TOB2P1-201ENST00000469761 992 ntBASIC21.39■■□□□ 1.01
COL11A1P12107 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.39■■□□□ 1.01
COL11A1P12107 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.39■■□□□ 1.01
COL11A1P12107 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.38■■□□□ 1.01
COL11A1P12107 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A1P12107 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A1P12107 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.38■■□□□ 1.01
COL11A1P12107 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.38■■□□□ 1.01
COL11A1P12107 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.38■■□□□ 1.01
COL11A1P12107 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.38■■□□□ 1.01
COL11A1P12107 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.38■■□□□ 1.01
COL11A1P12107 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL11A1P12107 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL11A1P12107 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.37■■□□□ 1.01
COL11A1P12107 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.37■■□□□ 1.01
COL11A1P12107 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL11A1P12107 EMBP1-201ENST00000458200 901 ntBASIC21.37■■□□□ 1.01
COL11A1P12107 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL11A1P12107 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.37■■□□□ 1.01
COL11A1P12107 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL11A1P12107 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
COL11A1P12107 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms