Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Gm3375-201ENSMUST00000203929 796 ntBASIC20.81■□□□□ 0.92
NeflP08551 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NeflP08551 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.81■□□□□ 0.92
NeflP08551 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NeflP08551 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NeflP08551 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NeflP08551 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.8■□□□□ 0.92
NeflP08551 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NeflP08551 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.8■□□□□ 0.92
NeflP08551 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NeflP08551 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.8■□□□□ 0.92
NeflP08551 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NeflP08551 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NeflP08551 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NeflP08551 Gm13168-201ENSMUST00000121771 632 ntBASIC20.79■□□□□ 0.92
NeflP08551 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NeflP08551 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NeflP08551 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.78■□□□□ 0.92
NeflP08551 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Gm10653-202ENSMUST00000139570 835 ntBASIC20.78■□□□□ 0.92
NeflP08551 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NeflP08551 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NeflP08551 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Gm38042-201ENSMUST00000191614 5208 ntBASIC20.77■□□□□ 0.92
NeflP08551 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NeflP08551 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
NeflP08551 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NeflP08551 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NeflP08551 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NeflP08551 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.77■□□□□ 0.91
NeflP08551 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC20.76■□□□□ 0.91
NeflP08551 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.76■□□□□ 0.91
NeflP08551 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Gm715-201ENSMUST00000117865 831 ntBASIC20.76■□□□□ 0.91
NeflP08551 Gm11539-201ENSMUST00000119837 557 ntBASIC20.76■□□□□ 0.91
NeflP08551 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.76■□□□□ 0.91
NeflP08551 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NeflP08551 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NeflP08551 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.76■□□□□ 0.91
NeflP08551 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC20.76■□□□□ 0.91
NeflP08551 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NeflP08551 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NeflP08551 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms