Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.69□□□□□ -0.22
Cldn1O88551 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cldn1O88551 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cldn1O88551 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.68□□□□□ -0.22
Cldn1O88551 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.68□□□□□ -0.22
Cldn1O88551 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.68□□□□□ -0.22
Cldn1O88551 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.68□□□□□ -0.22
Cldn1O88551 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.68□□□□□ -0.22
Cldn1O88551 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cldn1O88551 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cldn1O88551 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.68□□□□□ -0.22
Cldn1O88551 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.67□□□□□ -0.22
Cldn1O88551 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.67□□□□□ -0.22
Cldn1O88551 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cldn1O88551 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.67□□□□□ -0.22
Cldn1O88551 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Cldn1O88551 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.67□□□□□ -0.22
Cldn1O88551 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm10175-201ENSMUST00000086013 645 ntBASIC13.67□□□□□ -0.22
Cldn1O88551 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.67□□□□□ -0.22
Cldn1O88551 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.67□□□□□ -0.22
Cldn1O88551 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cldn1O88551 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.66□□□□□ -0.22
Cldn1O88551 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.66□□□□□ -0.22
Cldn1O88551 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.66□□□□□ -0.22
Cldn1O88551 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cldn1O88551 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cldn1O88551 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.66□□□□□ -0.22
Cldn1O88551 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cldn1O88551 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.66□□□□□ -0.22
Cldn1O88551 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms