Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.28□□□□□ -0.6
Vamp8O70404 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Vamp8O70404 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Vamp8O70404 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.28□□□□□ -0.6
Vamp8O70404 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Gm38285-201ENSMUST00000192928 922 ntBASIC11.28□□□□□ -0.6
Vamp8O70404 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.28□□□□□ -0.6
Vamp8O70404 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vamp8O70404 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vamp8O70404 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.28□□□□□ -0.6
Vamp8O70404 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Vamp8O70404 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Vamp8O70404 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Vamp8O70404 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vamp8O70404 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Vamp8O70404 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Vamp8O70404 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.27□□□□□ -0.6
Vamp8O70404 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vamp8O70404 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.27□□□□□ -0.61
Vamp8O70404 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.27□□□□□ -0.61
Vamp8O70404 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vamp8O70404 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vamp8O70404 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vamp8O70404 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vamp8O70404 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.27□□□□□ -0.61
Vamp8O70404 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.27□□□□□ -0.61
Vamp8O70404 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vamp8O70404 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.26□□□□□ -0.61
Vamp8O70404 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vamp8O70404 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.26□□□□□ -0.61
Vamp8O70404 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Vamp8O70404 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vamp8O70404 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Vamp8O70404 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vamp8O70404 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms