Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.88■□□□□ 0.29
Pja1O55176 Mir5130-201ENSMUST00000175160 84 ntBASIC16.88■□□□□ 0.29
Pja1O55176 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Gm45058-201ENSMUST00000205810 766 ntBASIC16.88■□□□□ 0.29
Pja1O55176 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.88■□□□□ 0.29
Pja1O55176 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.88■□□□□ 0.29
Pja1O55176 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pja1O55176 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Pja1O55176 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.87■□□□□ 0.29
Pja1O55176 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.87■□□□□ 0.29
Pja1O55176 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pja1O55176 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.87■□□□□ 0.29
Pja1O55176 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pja1O55176 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.87■□□□□ 0.29
Pja1O55176 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.87■□□□□ 0.29
Pja1O55176 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pja1O55176 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.86■□□□□ 0.29
Pja1O55176 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pja1O55176 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.86■□□□□ 0.29
Pja1O55176 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.86■□□□□ 0.29
Pja1O55176 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pja1O55176 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pja1O55176 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pja1O55176 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.85■□□□□ 0.29
Pja1O55176 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pja1O55176 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Pja1O55176 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pja1O55176 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.85■□□□□ 0.29
Pja1O55176 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.85■□□□□ 0.29
Pja1O55176 Gm7889-201ENSMUST00000185591 958 ntBASIC16.85■□□□□ 0.29
Pja1O55176 Gm37722-201ENSMUST00000193757 208 ntBASIC16.85■□□□□ 0.29
Pja1O55176 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.85■□□□□ 0.29
Pja1O55176 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pja1O55176 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.84■□□□□ 0.29
Pja1O55176 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.84■□□□□ 0.29
Pja1O55176 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms