Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d4bA6X942 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh2d4bA6X942 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Gm18421-201ENSMUST00000204122 625 ntBASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh2d4bA6X942 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.07■□□□□ 0.32
Sh2d4bA6X942 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh2d4bA6X942 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh2d4bA6X942 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh2d4bA6X942 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms