Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm6623-201ENSMUST00000173570 544 ntBASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-2A0A0G2JDP3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sybu-209ENSMUST00000228639 4113 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm13836-201ENSMUST00000121159 501 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm9013-201ENSMUST00000132939 882 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm10052-201ENSMUST00000168019 960 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm7729-201ENSMUST00000050143 801 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms