Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AC021146.9-201ENST00000512503 156 ntBASIC0.94□□□□□ -2.26
HS3ST3A1Q9Y663 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
HS3ST3A1Q9Y663 AC090617.8-201ENST00000623339 167 ntBASIC0.94□□□□□ -2.26
HS3ST3A1Q9Y663 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 Y_RNA.325-201ENST00000365171 122 ntBASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-808P-201ENST00000391233 108 ntBASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
HS3ST3A1Q9Y663 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-1312P-201ENST00000362425 108 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 SNORD114-26-201ENST00000363543 72 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 Y_RNA.407-201ENST00000383986 113 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-1246P-201ENST00000391064 107 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 MIR548J-201ENST00000408833 112 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-1223P-201ENST00000517124 104 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 MIR7107-201ENST00000611489 80 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 SNORA70.25-201ENST00000612741 95 ntBASIC0.92□□□□□ -2.26
HS3ST3A1Q9Y663 SNORA63.6-201ENST00000364921 119 ntBASIC0.91□□□□□ -2.26
HS3ST3A1Q9Y663 MIR598-201ENST00000384868 97 ntBASIC0.91□□□□□ -2.26
HS3ST3A1Q9Y663 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
HS3ST3A1Q9Y663 AC022709.1-201ENST00000615967 87 ntBASIC0.91□□□□□ -2.26
HS3ST3A1Q9Y663 HMGN2P22-201ENST00000427588 175 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 RNA5SP268-201ENST00000516828 124 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 RNA5SP94-201ENST00000516917 108 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 CYP3A54P-201ENST00000566950 75 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 MIR548AD-201ENST00000584780 82 ntBASIC0.9□□□□□ -2.27
HS3ST3A1Q9Y663 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 MIR548C-201ENST00000384815 97 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 MIR516B1-201ENST00000385211 90 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 RNA5SP227-201ENST00000516184 113 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 RNU6-980P-201ENST00000516925 103 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 AC025627.3-201ENST00000582078 182 ntBASIC0.89□□□□□ -2.27
HS3ST3A1Q9Y663 RNU6-520P-201ENST00000384717 104 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 SNORD110-201ENST00000408189 75 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 MIR548AG1-201ENST00000579932 66 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 MIR4473-201ENST00000583731 91 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 uc_338.10-201ENST00000621872 182 ntBASIC0.88□□□□□ -2.27
HS3ST3A1Q9Y663 AC006210.1-201ENST00000424882 111 ntBASIC0.87□□□□□ -2.27
HS3ST3A1Q9Y663 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
HS3ST3A1Q9Y663 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
HS3ST3A1Q9Y663 MIR4752-201ENST00000579672 72 ntBASIC0.87□□□□□ -2.27
HS3ST3A1Q9Y663 SNORA9.1-201ENST00000362412 131 ntBASIC0.86□□□□□ -2.27
HS3ST3A1Q9Y663 RNU6-337P-201ENST00000391243 106 ntBASIC0.86□□□□□ -2.27
HS3ST3A1Q9Y663 RNU4-88P-201ENST00000411220 86 ntBASIC0.86□□□□□ -2.27
HS3ST3A1Q9Y663 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.86□□□□□ -2.27
HS3ST3A1Q9Y663 SNORA49-201ENST00000386157 136 ntBASIC0.85□□□□□ -2.27
HS3ST3A1Q9Y663 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
HS3ST3A1Q9Y663 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
HS3ST3A1Q9Y663 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
HS3ST3A1Q9Y663 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
HS3ST3A1Q9Y663 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 Y_RNA.74-201ENST00000362911 99 ntBASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 Y_RNA.282-201ENST00000364793 102 ntBASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 MIR519A2-201ENST00000384990 87 ntBASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 RNU6-231P-201ENST00000517122 103 ntBASIC0.84□□□□□ -2.27
HS3ST3A1Q9Y663 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.84□□□□□ -2.28
HS3ST3A1Q9Y663 RNY1P8-201ENST00000383970 114 ntBASIC0.83□□□□□ -2.28
HS3ST3A1Q9Y663 SNORD116-16-201ENST00000384533 92 ntBASIC0.83□□□□□ -2.28
HS3ST3A1Q9Y663 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
HS3ST3A1Q9Y663 RNU4-45P-201ENST00000365469 141 ntBASIC0.82□□□□□ -2.28
HS3ST3A1Q9Y663 AC069271.1-201ENST00000445577 156 ntBASIC0.82□□□□□ -2.28
HS3ST3A1Q9Y663 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
HS3ST3A1Q9Y663 SNORA40.16-201ENST00000517238 121 ntBASIC0.82□□□□□ -2.28
HS3ST3A1Q9Y663 AC243829.6-201ENST00000612652 106 ntBASIC0.82□□□□□ -2.28
HS3ST3A1Q9Y663 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 AC244090.1-201ENST00000441884 93 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-1232P-201ENST00000516299 86 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 MIR5706-201ENST00000579841 80 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-753P-201ENST00000363926 107 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-35P-201ENST00000384530 107 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 MIR1255B2-201ENST00000408618 67 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 AL021921.1-201ENST00000442774 93 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-175P-201ENST00000516896 107 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 U6.96-201ENST00000636425 70 ntBASIC0.8□□□□□ -2.28
HS3ST3A1Q9Y663 Y_RNA.379-201ENST00000365653 102 ntBASIC0.79□□□□□ -2.28
HS3ST3A1Q9Y663 RNU6-518P-201ENST00000516056 96 ntBASIC0.79□□□□□ -2.28
HS3ST3A1Q9Y663 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
HS3ST3A1Q9Y663 MIR20A-201ENST00000362279 71 ntBASIC0.78□□□□□ -2.28
HS3ST3A1Q9Y663 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
HS3ST3A1Q9Y663 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
HS3ST3A1Q9Y663 RNU7-119P-201ENST00000459279 63 ntBASIC0.78□□□□□ -2.28
HS3ST3A1Q9Y663 MIR6779-201ENST00000617283 64 ntBASIC0.78□□□□□ -2.28
HS3ST3A1Q9Y663 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
HS3ST3A1Q9Y663 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
HS3ST3A1Q9Y663 MIR216A-201ENST00000385063 110 ntBASIC0.77□□□□□ -2.29
HS3ST3A1Q9Y663 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
HS3ST3A1Q9Y663 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.77□□□□□ -2.29
HS3ST3A1Q9Y663 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 243.7 ms