Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 SNORD83B-201ENST00000386745 93 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 RNU6-592P-201ENST00000411333 103 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 MIR3179-1-201ENST00000578940 84 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 MIR3179-2-201ENST00000579107 84 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 MIR3179-3-201ENST00000579566 84 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 MIR3179-4-201ENST00000617599 84 ntBASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.69□□□□□ -2.52
FOXA2Q9Y261 RNU6-824P-201ENST00000363724 104 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 RNU6-81P-201ENST00000365608 104 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 RNU6-260P-201ENST00000384092 107 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 MIR517B-201ENST00000385102 67 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 SNORD64-201ENST00000386683 67 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 MT-TQ-201ENST00000387372 72 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 snoU13.17-201ENST00000458802 104 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 SCARNA18B-201ENST00000458806 135 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 SNORD22.1-201ENST00000516331 125 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 MIR378F-201ENST00000578143 78 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 AL365222.1-201ENST00000614661 98 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 U6.96-201ENST00000636425 70 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 MIR4773-1-201ENST00000637203 78 ntBASIC-0.7□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 SNORD74.6-201ENST00000364796 70 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 RNU6-106P-201ENST00000384405 107 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 RNU6-905P-201ENST00000384434 107 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 RNU6-554P-201ENST00000410466 106 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 MIR4796-201ENST00000580742 81 ntBASIC-0.71□□□□□ -2.52
FOXA2Q9Y261 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 MT-TR-201ENST00000387439 65 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 MIR1236-201ENST00000408340 102 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 RNU6-109P-201ENST00000516364 107 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 RNU6-184P-201ENST00000516514 107 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 YWHAEP3-201ENST00000582767 121 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 MIR4324-201ENST00000584846 72 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 uc_338.19-201ENST00000616808 99 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 MIR382-201ENST00000637119 76 ntBASIC-0.72□□□□□ -2.52
FOXA2Q9Y261 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 RNU6-162P-201ENST00000516228 103 ntBASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 RNA5SP395-201ENST00000516567 118 ntBASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 MIR6509-201ENST00000614603 85 ntBASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 MIR6129-201ENST00000616087 109 ntBASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 U7.3-201ENST00000616123 62 ntBASIC-0.73□□□□□ -2.53
FOXA2Q9Y261 SNORD95.1-201ENST00000364099 68 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 SNORA19-201ENST00000384737 128 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 MIR203A-201ENST00000384836 110 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 AP000533.3-201ENST00000447704 118 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 RNU7-134P-201ENST00000458997 64 ntBASIC-0.74□□□□□ -2.53
FOXA2Q9Y261 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 AL691482.2-201ENST00000457453 84 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 RNU6-274P-201ENST00000459566 107 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 AC022137.1-201ENST00000483735 151 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 RNA5SP147-201ENST00000516493 109 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 MIR3657-201ENST00000584818 117 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 AC090617.8-201ENST00000623339 167 ntBASIC-0.75□□□□□ -2.53
FOXA2Q9Y261 RNU6-834P-201ENST00000362367 110 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 SNORA2.1-201ENST00000363089 137 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 SNORA62.4-201ENST00000365504 151 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 RNA5SP25-201ENST00000410815 110 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 U6.81-201ENST00000612550 106 ntBASIC-0.76□□□□□ -2.53
FOXA2Q9Y261 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.77□□□□□ -2.53
FOXA2Q9Y261 MIR548M-201ENST00000408260 86 ntBASIC-0.77□□□□□ -2.53
FOXA2Q9Y261 RNU6-589P-201ENST00000516485 107 ntBASIC-0.77□□□□□ -2.53
FOXA2Q9Y261 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.77□□□□□ -2.53
FOXA2Q9Y261 RNU6-208P-201ENST00000362431 107 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 RNU6-766P-201ENST00000362478 107 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 SNORA33.1-201ENST00000364957 130 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 RNU6-22P-201ENST00000384355 107 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 RNU7-153P-201ENST00000516455 62 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 AC140658.3-201ENST00000567603 271 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 MIR6738-201ENST00000619620 64 ntBASIC-0.78□□□□□ -2.53
FOXA2Q9Y261 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 AL450471.1-201ENST00000447509 127 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 SNORD18.2-201ENST00000459604 70 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 MIR3115-201ENST00000577915 68 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 AL353803.5-201ENST00000599815 141 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 MIR6086-201ENST00000638065 55 ntBASIC-0.79□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.8□□□□□ -2.54
FOXA2Q9Y261 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.8□□□□□ -2.54
FOXA2Q9Y261 MIR8485-201ENST00000401372 91 ntBASIC-0.8□□□□□ -2.54
FOXA2Q9Y261 MIR124-2-201ENST00000385081 109 ntBASIC-0.81□□□□□ -2.54
FOXA2Q9Y261 MTATP8P2-201ENST00000435212 202 ntBASIC-0.81□□□□□ -2.54
FOXA2Q9Y261 RNU6-158P-201ENST00000517104 100 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms