Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-742P-201ENST00000365289 107 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-721P-201ENST00000410155 105 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 AL451105.1-201ENST00000450005 189 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 RNA5SP220-201ENST00000516298 104 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 RN7SKP88-201ENST00000516847 250 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 RNA5SP94-201ENST00000516917 108 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 7SK.8-201ENST00000612110 250 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 7SK.13-201ENST00000622040 250 ntBASIC1.84□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-1008P-201ENST00000384160 104 ntBASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 RNU6-59P-201ENST00000384787 107 ntBASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 SNORD79.1-201ENST00000516069 84 ntBASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 MIR4473-201ENST00000583731 91 ntBASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 MIR6078-201ENST00000611069 100 ntBASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
PDZRN3Q9UPQ7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 RNU6-910P-201ENST00000390844 107 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 U7.7-201ENST00000459276 60 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 RNU7-154P-201ENST00000516194 62 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 U2.18-201ENST00000622185 84 ntBASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PDZRN3Q9UPQ7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.81□□□□□ -2.12
PDZRN3Q9UPQ7 MIR329-2-201ENST00000385029 84 ntBASIC1.81□□□□□ -2.12
PDZRN3Q9UPQ7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.81□□□□□ -2.12
PDZRN3Q9UPQ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDZRN3Q9UPQ7 MIR429-201ENST00000362106 83 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 SNORD115-25-201ENST00000362619 82 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 RNU6-337P-201ENST00000391243 106 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 MIR548H4-201ENST00000408689 111 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 RPS29P23-201ENST00000458635 123 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.8□□□□□ -2.12
PDZRN3Q9UPQ7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
PDZRN3Q9UPQ7 MIR125B1-201ENST00000385236 88 ntBASIC1.79□□□□□ -2.12
PDZRN3Q9UPQ7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PDZRN3Q9UPQ7 RNU6-828P-201ENST00000364876 107 ntBASIC1.77□□□□□ -2.13
PDZRN3Q9UPQ7 SNORD114-22-201ENST00000365423 72 ntBASIC1.77□□□□□ -2.13
PDZRN3Q9UPQ7 MIR3678-201ENST00000578455 94 ntBASIC1.77□□□□□ -2.13
PDZRN3Q9UPQ7 AC025627.3-201ENST00000582078 182 ntBASIC1.76□□□□□ -2.13
PDZRN3Q9UPQ7 RNU6-945P-201ENST00000383947 107 ntBASIC1.75□□□□□ -2.13
PDZRN3Q9UPQ7 SNORD110-201ENST00000408189 75 ntBASIC1.75□□□□□ -2.13
PDZRN3Q9UPQ7 AC006210.1-201ENST00000424882 111 ntBASIC1.75□□□□□ -2.13
PDZRN3Q9UPQ7 MIR6828-201ENST00000636181 60 ntBASIC1.75□□□□□ -2.13
PDZRN3Q9UPQ7 MIR7974-201ENST00000615835 79 ntBASIC1.74□□□□□ -2.13
PDZRN3Q9UPQ7 AC068338.1-201ENST00000565567 176 ntBASIC1.73□□□□□ -2.13
PDZRN3Q9UPQ7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.73□□□□□ -2.13
PDZRN3Q9UPQ7 MIR29B1-201ENST00000385015 81 ntBASIC1.72□□□□□ -2.13
PDZRN3Q9UPQ7 MIR3660-201ENST00000584845 100 ntBASIC1.72□□□□□ -2.13
PDZRN3Q9UPQ7 MIR6773-201ENST00000612812 74 ntBASIC1.72□□□□□ -2.13
PDZRN3Q9UPQ7 MIR6734-201ENST00000621166 68 ntBASIC1.72□□□□□ -2.13
PDZRN3Q9UPQ7 Y_RNA.139-201ENST00000363464 102 ntBASIC1.71□□□□□ -2.14
PDZRN3Q9UPQ7 RNU6-974P-201ENST00000384099 108 ntBASIC1.71□□□□□ -2.14
PDZRN3Q9UPQ7 RNA5SP470-201ENST00000516463 106 ntBASIC1.71□□□□□ -2.14
PDZRN3Q9UPQ7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PDZRN3Q9UPQ7 AC244090.1-201ENST00000441884 93 ntBASIC1.7□□□□□ -2.14
PDZRN3Q9UPQ7 RNU1-93P-201ENST00000364704 169 ntBASIC1.69□□□□□ -2.14
PDZRN3Q9UPQ7 SNORD105-201ENST00000386910 85 ntBASIC1.69□□□□□ -2.14
PDZRN3Q9UPQ7 MIR548AA1-201ENST00000384971 97 ntBASIC1.68□□□□□ -2.14
PDZRN3Q9UPQ7 SNORA49-201ENST00000386157 136 ntBASIC1.68□□□□□ -2.14
PDZRN3Q9UPQ7 RNU6-995P-201ENST00000391244 107 ntBASIC1.68□□□□□ -2.14
PDZRN3Q9UPQ7 RNU6-1267P-201ENST00000410747 107 ntBASIC1.68□□□□□ -2.14
PDZRN3Q9UPQ7 RNU6-1262P-201ENST00000516217 96 ntBASIC1.68□□□□□ -2.14
PDZRN3Q9UPQ7 MIR20A-201ENST00000362279 71 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 MIR96-201ENST00000362288 78 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 SNORD26-201ENST00000384147 75 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 RNA5SP227-201ENST00000516184 113 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 MIR3612-201ENST00000579753 87 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 AC022709.1-201ENST00000615967 87 ntBASIC1.67□□□□□ -2.14
PDZRN3Q9UPQ7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 SNORD12-201ENST00000391002 90 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 HMGN2P22-201ENST00000427588 175 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 AC002429.1-201ENST00000437672 148 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 SNORA70.22-201ENST00000517160 124 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 SNORA70.25-201ENST00000612741 95 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.66□□□□□ -2.14
PDZRN3Q9UPQ7 SNORA36.1-201ENST00000363424 132 ntBASIC1.65□□□□□ -2.15
PDZRN3Q9UPQ7 MIR573-201ENST00000384964 99 ntBASIC1.65□□□□□ -2.15
PDZRN3Q9UPQ7 MIRLET7B-201ENST00000385140 83 ntBASIC1.65□□□□□ -2.15
PDZRN3Q9UPQ7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.65□□□□□ -2.15
PDZRN3Q9UPQ7 RNA5SP480-201ENST00000516840 109 ntBASIC1.65□□□□□ -2.15
PDZRN3Q9UPQ7 SNORD45.2-201ENST00000363552 72 ntBASIC1.63□□□□□ -2.15
PDZRN3Q9UPQ7 Y_RNA.206-201ENST00000364136 102 ntBASIC1.63□□□□□ -2.15
PDZRN3Q9UPQ7 RNY1P8-201ENST00000383970 114 ntBASIC1.63□□□□□ -2.15
PDZRN3Q9UPQ7 MIR150-201ENST00000385048 84 ntBASIC1.62□□□□□ -2.15
PDZRN3Q9UPQ7 MTRNR2L9-201ENST00000622562 75 ntBASIC1.62□□□□□ -2.15
PDZRN3Q9UPQ7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PDZRN3Q9UPQ7 SNORD114-26-201ENST00000363543 72 ntBASIC1.61□□□□□ -2.15
PDZRN3Q9UPQ7 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
PDZRN3Q9UPQ7 MIR26B-201ENST00000362251 77 ntBASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 SNORD2-201ENST00000459163 69 ntBASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 RNA5SP268-201ENST00000516828 124 ntBASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 MIR4752-201ENST00000579672 72 ntBASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 MIR7107-201ENST00000611489 80 ntBASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PDZRN3Q9UPQ7 RNU6-502P-201ENST00000362419 108 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 Y_RNA.345-201ENST00000365384 92 ntBASIC1.59□□□□□ -2.15
PDZRN3Q9UPQ7 MIR222-201ENST00000384992 110 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms